FFCP PHASE1:Hg19::chr18:46065541..46065568,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:46065541..46065568,+ to FFCP PHASE1:Hg19::chr18:46065541..46065568,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9811 | |EntrezGene=9811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23925 | |HGNC=23925 | ||
|TSSclassifier=strong | |||
|UniProt=O43310 | |UniProt=O43310 | ||
|association_with_transcript=114bp_to_ENST00000382998,NM_001142397,NM_014772,uc002ldc.2,uc002ldd.2_5end | |||
|cluster_id=chr18:46065541..46065568,+ | |||
|coexpression_cluster_id=C3722 | |||
|description=CAGE_peak_3_at_CTIF_5end | |||
|id=chr18:46065541..46065568,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.36e-25!180;CL:0000057!4.11e-18!75;CL:0000222!2.07e-17!119;CL:0000220!6.01e-16!246;CL:0002321!1.28e-15!248;CL:0000183!1.79e-13!59;CL:0000192!3.07e-12!42;CL:0000514!3.07e-12!42;CL:0000680!5.41e-12!57;CL:0000056!5.41e-12!57;CL:0000355!5.41e-12!57;CL:0000187!6.57e-12!54;CL:0000393!5.34e-11!60;CL:0000211!5.34e-11!60;CL:0000359!2.23e-10!32;CL:0000136!1.07e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.32e-10;32!CL:0000192;4.03e-09;43!CL:0000349;9.65e-09;19!CL:0000057;7.15e-08;73!CL:0000136;7.45e-08;13!CL:0000187;3.26e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.31e-19,76;CL:0000222,7.57e-18,121;CL:0002321,1.98e-14,250;CL:0000192,1.79e-12,43;CL:0000514,1.79e-12,43;CL:0000680,2.84e-12,58;CL:0000056,2.84e-12,58;CL:0000355,2.84e-12,58;CL:0000187,3.53e-12,55;CL:0000359,1.10e-10,32;CL:0000393,1.23e-10,61;CL:0000211,1.23e-10,61;CL:0000349,7.90e-09,19;CL:0000136,6.52e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.03e-09;43!CL:0000355;6.44e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.74e-24!365;UBERON:0000119!1.09e-21!312;UBERON:0000483!1.30e-20!309;UBERON:0000477!7.64e-19!286;UBERON:0004111!1.17e-18!241;UBERON:0002049!1.07e-16!79;UBERON:0007798!1.07e-16!79;UBERON:0000468!1.42e-16!659;UBERON:0000025!1.55e-16!194;UBERON:0004872!4.54e-16!84;UBERON:0003914!2.59e-14!118;UBERON:0005256!5.83e-14!143;UBERON:0000467!2.39e-13!625;UBERON:0000055!2.98e-13!69;UBERON:0000914!4.10e-13!83;UBERON:0002329!4.10e-13!83;UBERON:0003077!4.10e-13!83;UBERON:0003059!4.10e-13!83;UBERON:0007282!4.10e-13!83;UBERON:0009618!4.10e-13!83;UBERON:0007285!4.10e-13!83;UBERON:0000480!4.82e-13!626;UBERON:0001981!5.65e-13!60;UBERON:0007500!5.65e-13!60;UBERON:0004537!5.65e-13!60;UBERON:0006965!5.65e-13!60;UBERON:0000481!1.32e-12!347;UBERON:0001637!1.62e-12!42;UBERON:0003509!1.62e-12!42;UBERON:0004572!1.62e-12!42;UBERON:0002100!2.48e-12!216;UBERON:0000490!6.26e-12!138;UBERON:0000486!1.42e-11!82;UBERON:0001134!2.43e-11!61;UBERON:0002036!2.43e-11!61;UBERON:0003082!2.43e-11!61;UBERON:0004535!2.55e-11!110;UBERON:0002385!3.32e-11!63;UBERON:0001015!3.32e-11!63;UBERON:0000383!3.32e-11!63;UBERON:0004290!4.17e-11!70;UBERON:0004573!5.69e-11!33;UBERON:0004571!5.69e-11!33;UBERON:0001009!1.19e-10!113;UBERON:0004121!1.52e-10!169;UBERON:0000924!3.04e-10!173;UBERON:0006601!3.04e-10!173;UBERON:0000923!4.34e-08!604;UBERON:0005291!4.34e-08!604;UBERON:0006598!4.34e-08!604;UBERON:0002532!4.34e-08!604;UBERON:0002050!4.82e-08!605;UBERON:0005423!4.82e-08!605;UBERON:0000922!7.73e-08!612;UBERON:0000033!8.62e-08!123;UBERON:0000947!1.01e-07!21;UBERON:0010191!1.01e-07!21;UBERON:0003102!1.99e-07!95;UBERON:0000064!6.47e-07!219;UBERON:0005631!8.13e-07!14;UBERON:0000158!8.13e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.61e-10;33!UBERON:0004571;2.61e-10;33!UBERON:0001637;8.08e-10;42!UBERON:0003509;8.08e-10;42!UBERON:0004572;8.08e-10;42!UBERON:0007500;2.62e-08;56!UBERON:0001981;2.62e-08;56!UBERON:0004537;2.62e-08;56!UBERON:0000947;6.50e-08;21!UBERON:0010191;6.50e-08;21!UBERON:0000055;5.77e-07;65!UBERON:0002049;6.61e-07;75!UBERON:0007798;6.61e-07;75 | |||
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|short_description=p3@CTIF | |||
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Latest revision as of 16:35, 19 September 2015
Short description: | p3@CTIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTIF_5end |
Coexpression cluster: | C3722_Preadipocyte_mature_Adipocyte_Fibroblast_Hepatic_Smooth_Pericytes |
Association with transcript: | 114bp_to_ENST00000382998, NM_001142397, NM_014772, uc002ldc.2, uc002ldd.2_5end |
EntrezGene: | CTIF |
HGNC: | 23925 |
UniProt: | O43310 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.31e-19 | 76 |
mesodermal cell | 7.57e-18 | 121 |
embryonic cell | 1.98e-14 | 250 |
smooth muscle cell | 1.79e-12 | 43 |
smooth muscle myoblast | 1.79e-12 | 43 |
muscle precursor cell | 2.84e-12 | 58 |
myoblast | 2.84e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.84e-12 | 58 |
muscle cell | 3.53e-12 | 55 |
vascular associated smooth muscle cell | 1.10e-10 | 32 |
electrically responsive cell | 1.23e-10 | 61 |
electrically active cell | 1.23e-10 | 61 |
extraembryonic cell | 7.90e-09 | 19 |
fat cell | 6.52e-08 | 15 |