FFCP PHASE1:Hg19::chr5:110409053..110409100,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:110409053..110409100,+
|short_description=p1@TSLP
|description=CAGE_peak_1_at_TSLP_5end
|association_with_transcript=27bp_to_uc010jbt.1_5end
|EntrezGene=8...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85480 | |EntrezGene=85480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30743 | |HGNC=30743 | ||
|TSSclassifier=strong | |||
|UniProt=Q96AU7 | |UniProt=Q96AU7 | ||
|association_with_transcript=27bp_to_uc010jbt.1_5end | |||
|cluster_id=chr5:110409053..110409100,+ | |||
|coexpression_cluster_id=C1948 | |||
|description=CAGE_peak_1_at_TSLP_5end | |||
|id=chr5:110409053..110409100,+ | |||
|ontology_enrichment_celltype=CL:0000680!3.73e-16!57;CL:0000056!3.73e-16!57;CL:0000355!3.73e-16!57;CL:0000393!8.08e-16!60;CL:0000211!8.08e-16!60;CL:0000187!5.40e-15!54;CL:0000192!8.32e-14!42;CL:0000514!8.32e-14!42;CL:0000183!1.35e-13!59;CL:0000055!8.97e-13!180;CL:0000359!4.16e-12!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.02e-11;32!CL:0000192;3.07e-11;43!CL:0000393;4.66e-09;61!CL:0000211;4.66e-09;61!CL:0000187;9.20e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.85e-17,58;CL:0000056,2.85e-17,58;CL:0000355,2.85e-17,58;CL:0000393,6.41e-17,61;CL:0000211,6.41e-17,61;CL:0000187,5.07e-16,55;CL:0000192,5.42e-15,43;CL:0000514,5.42e-15,43;CL:0000359,1.47e-12,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.07e-11;43!CL:0000355;3.45e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!8.00e-16!63;UBERON:0001015!8.00e-16!63;UBERON:0000383!8.00e-16!63;UBERON:0001134!2.07e-15!61;UBERON:0002036!2.07e-15!61;UBERON:0003082!2.07e-15!61;UBERON:0004290!4.99e-14!70;UBERON:0000914!2.32e-13!83;UBERON:0002329!2.32e-13!83;UBERON:0003077!2.32e-13!83;UBERON:0003059!2.32e-13!83;UBERON:0007282!2.32e-13!83;UBERON:0009618!2.32e-13!83;UBERON:0007285!2.32e-13!83;UBERON:0000486!7.69e-13!82;UBERON:0000481!7.12e-11!347;UBERON:0001637!3.12e-10!42;UBERON:0003509!3.12e-10!42;UBERON:0004572!3.12e-10!42;UBERON:0000922!5.26e-09!612;UBERON:0007100!7.49e-09!27;UBERON:0002050!7.90e-09!605;UBERON:0005423!7.90e-09!605;UBERON:0004573!9.71e-09!33;UBERON:0004571!9.71e-09!33;UBERON:0000923!1.11e-08!604;UBERON:0005291!1.11e-08!604;UBERON:0006598!1.11e-08!604;UBERON:0002532!1.11e-08!604;UBERON:0000468!1.41e-08!659;UBERON:0000948!4.62e-08!24;UBERON:0005498!4.62e-08!24;UBERON:0004140!4.62e-08!24;UBERON:0009881!4.62e-08!24;UBERON:0004141!4.62e-08!24;UBERON:0003084!4.62e-08!24;UBERON:0007005!4.62e-08!24;UBERON:0004139!4.62e-08!24;UBERON:0004291!4.62e-08!24;UBERON:0004872!5.32e-08!84;UBERON:0003104!6.09e-08!238;UBERON:0009142!6.09e-08!238;UBERON:0000480!1.10e-07!626;UBERON:0005256!1.14e-07!143;UBERON:0000467!1.44e-07!625;UBERON:0002049!1.58e-07!79;UBERON:0007798!1.58e-07!79;UBERON:0001009!3.04e-07!113;UBERON:0002100!5.85e-07!216;UBERON:0000490!5.92e-07!138;UBERON:0000475!8.00e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.04e-09;25!UBERON:0000948;4.69e-08;22!UBERON:0004573;3.96e-07;33!UBERON:0004571;3.96e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,4.16e-17,64;UBERON:0001015,4.16e-17,64;UBERON:0000383,4.16e-17,64;UBERON:0001134,1.16e-16,62;UBERON:0002036,1.16e-16,62;UBERON:0003082,1.16e-16,62;UBERON:0002329,1.93e-15,71;UBERON:0003059,1.93e-15,71;UBERON:0007282,1.93e-15,71;UBERON:0004290,1.93e-15,71;UBERON:0009618,1.93e-15,71;UBERON:0003077,2.32e-15,72;UBERON:0007285,2.32e-15,72;UBERON:0007524,9.03e-15,73;UBERON:0000486,8.67e-14,83;UBERON:0007503,1.65e-12,78;UBERON:0005256,1.27e-10,122;UBERON:0001637,1.09e-09,42;UBERON:0003509,1.09e-09,42;UBERON:0004572,1.09e-09,42;UBERON:0007100,2.02e-09,27;UBERON:0003104,1.24e-08,160;UBERON:0009142,1.24e-08,160;UBERON:0000948,1.44e-08,24;UBERON:0005498,1.44e-08,24;UBERON:0004140,1.44e-08,24;UBERON:0009881,1.44e-08,24;UBERON:0004141,1.44e-08,24;UBERON:0003084,1.44e-08,24;UBERON:0007005,1.44e-08,24;UBERON:0004139,1.44e-08,24;UBERON:0004291,1.44e-08,24;UBERON:0002050,2.42e-08,564;UBERON:0004573,2.70e-08,33;UBERON:0004571,2.70e-08,33;UBERON:0000922,4.51e-08,592;UBERON:0000490,5.20e-08,148;UBERON:0000923,5.22e-08,560;UBERON:0010316,5.22e-08,560;UBERON:0005291,5.22e-08,560;UBERON:0006598,5.22e-08,560;UBERON:0010317,5.22e-08,560;UBERON:0002532,5.22e-08,560;UBERON:0004872,9.31e-08,83;UBERON:0005423,2.35e-07,581;UBERON:0002100,2.99e-07,199;UBERON:0001009,3.37e-07,112;UBERON:0002049,5.45e-07,78;UBERON:0007798,5.45e-07,78 | |||
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| ||
|short_description=p1@TSLP | |||
}} | }} |
Latest revision as of 16:59, 19 September 2015
Short description: | p1@TSLP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSLP_5end |
Coexpression cluster: | C1948_mesenchymal_Smooth_Skeletal_Lens_Keratocytes_cervical_salivary |
Association with transcript: | 27bp_to_uc010jbt.1_5end |
EntrezGene: | TSLP |
HGNC: | 30743 |
UniProt: | Q96AU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.85e-17 | 58 |
myoblast | 2.85e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.85e-17 | 58 |
electrically responsive cell | 6.41e-17 | 61 |
electrically active cell | 6.41e-17 | 61 |
muscle cell | 5.07e-16 | 55 |
smooth muscle cell | 5.42e-15 | 43 |
smooth muscle myoblast | 5.42e-15 | 43 |
vascular associated smooth muscle cell | 1.47e-12 | 32 |