FFCP PHASE1:Hg19::chr11:67070950..67070963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54961 | |EntrezGene=54961 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30581 | |HGNC=30581 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUG3 | |UniProt=C9JUG3 | ||
|association_with_transcript=0bp_to_ENST00000308298_5end | |association_with_transcript=0bp_to_ENST00000308298_5end | ||
|cluster_id=chr11:67070950..67070963,+ | |||
|description=CAGE_peak_2_at_SSH3_5end | |description=CAGE_peak_2_at_SSH3_5end | ||
|id=chr11:67070950..67070963,+ | |id=chr11:67070950..67070963,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.88e-19!254;CL:0002076!4.57e-11!43;CL:0000223!8.72e-09!59;CL:0002321!3.41e-07!248;CL:0000220!8.87e-07!246 | |ontology_enrichment_celltype=CL:0000066!1.88e-19!254;CL:0002076!4.57e-11!43;CL:0000223!8.72e-09!59;CL:0002321!3.41e-07!248;CL:0000220!8.87e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.46e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.29e-13,253;CL:0002076,1.85e-09,42;CL:0000223,2.69e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!9.35e-10!143;DOID:305!2.54e-09!106 | |ontology_enrichment_disease=DOID:0050687!9.35e-10!143;DOID:305!2.54e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.69e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!6.25e-08!104 | |ontology_enrichment_uberon=UBERON:0000464!6.25e-08!104 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SSH3 | |short_description=p2@SSH3 | ||
}} | }} |
Latest revision as of 17:21, 19 September 2015
Short description: | p2@SSH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SSH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308298_5end |
EntrezGene: | SSH3 |
HGNC: | 30581 |
UniProt: | C9JUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.29e-13 | 253 |
endo-epithelial cell | 1.85e-09 | 42 |
endodermal cell | 2.69e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.69e-08 | 143 |