FFCP PHASE1:Hg19::chr11:67070968..67071046,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54961 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30581 | |||
|TSSclassifier=strong | |||
|UniProt=E9PMS1 | |||
|association_with_transcript=0bp_to_ENST00000532600_5end | |||
|cluster_id=chr11:67070968..67071046,+ | |||
|description=CAGE_peak_1_at_SSH3_5end | |||
|id=chr11:67070968..67071046,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.39e-23!254;CL:0002076!5.99e-13!43;CL:0000223!7.92e-10!59;CL:0002251!3.87e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.37e-10;42!CL:0002251;4.05e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-23,253;CL:0002076,6.96e-13,42;CL:0000223,1.00e-09,58;CL:0002251,4.42e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.06e-14!365;UBERON:0004119!2.01e-13!169;UBERON:0000925!2.01e-13!169;UBERON:0006595!2.01e-13!169;UBERON:0000062!8.82e-12!511;UBERON:0000468!3.15e-11!659;UBERON:0000481!4.43e-11!347;UBERON:0000467!1.42e-10!625;UBERON:0000480!2.95e-10!626;UBERON:0001008!1.82e-09!45;UBERON:0001007!2.27e-09!155;UBERON:0001555!2.27e-09!155;UBERON:0007026!2.27e-09!155;UBERON:0002100!2.53e-09!216;UBERON:0006554!3.05e-09!44;UBERON:0009569!4.83e-09!113;UBERON:0005177!7.37e-09!107;UBERON:0000064!1.38e-08!219;UBERON:0000464!2.10e-08!104;UBERON:0003064!2.50e-08!37;UBERON:0000161!4.14e-08!35;UBERON:0004111!7.21e-08!241;UBERON:0000466!9.25e-08!126;UBERON:0003104!2.53e-07!238;UBERON:0009142!2.53e-07!238;UBERON:0002050!2.62e-07!605;UBERON:0005423!2.62e-07!605;UBERON:0000058!2.94e-07!26;UBERON:0000923!2.96e-07!604;UBERON:0005291!2.96e-07!604;UBERON:0006598!2.96e-07!604;UBERON:0002532!2.96e-07!604;UBERON:0000483!5.21e-07!309;UBERON:0000922!5.53e-07!612;UBERON:0007023!6.36e-07!115;UBERON:0004921!7.60e-07!129;UBERON:0004185!7.60e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.97e-07;30!UBERON:0001008;1.97e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.55e-13,160;UBERON:0000925,6.55e-13,160;UBERON:0006595,6.55e-13,160;UBERON:0001008,2.01e-11,48;UBERON:0006554,3.42e-11,47;UBERON:0001007,6.20e-09,145;UBERON:0001555,6.20e-09,145;UBERON:0007026,6.20e-09,145;UBERON:0009569,6.61e-09,112;UBERON:0000161,3.37e-08,36;UBERON:0002100,3.69e-08,199;UBERON:0004111,8.67e-08,240;UBERON:0005177,1.10e-07,101;UBERON:0000483,4.79e-07,306;UBERON:0007023,7.09e-07,114 | |||
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| |||
|short_description=p1@SSH3 | |||
}} |
Latest revision as of 17:22, 19 September 2015
Short description: | p1@SSH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532600_5end |
EntrezGene: | SSH3 |
HGNC: | 30581 |
UniProt: | E9PMS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-23 | 253 |
endo-epithelial cell | 6.96e-13 | 42 |
endodermal cell | 1.00e-09 | 58 |
epithelial cell of alimentary canal | 4.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.55e-13 | 160 |
endoderm | 6.55e-13 | 160 |
presumptive endoderm | 6.55e-13 | 160 |
renal system | 2.01e-11 | 48 |
urinary system structure | 3.42e-11 | 47 |
digestive system | 6.20e-09 | 145 |
digestive tract | 6.20e-09 | 145 |
primitive gut | 6.20e-09 | 145 |
subdivision of trunk | 6.61e-09 | 112 |
orifice | 3.37e-08 | 36 |
trunk | 3.69e-08 | 199 |
anatomical conduit | 8.67e-08 | 240 |
trunk region element | 1.10e-07 | 101 |
epithelium | 4.79e-07 | 306 |
adult organism | 7.09e-07 | 114 |