FFCP PHASE1:Hg19::chr10:88126541..88126566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2894 | |EntrezGene=2894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4575 | |HGNC=4575 | ||
|TSSclassifier=strong | |||
|UniProt=G3V186,A8KAN9,Q9ULK0 | |UniProt=G3V186,A8KAN9,Q9ULK0 | ||
|association_with_transcript=-291bp_to_ENST00000464741,NM_017551,uc001kdl.1,uc009xsu.1_5end | |association_with_transcript=-291bp_to_ENST00000464741,NM_017551,uc001kdl.1,uc009xsu.1_5end | ||
|cluster_id=chr10:88126541..88126566,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GRID1_5end | |description=CAGE_peak_1_at_GRID1_5end | ||
|id=chr10:88126541..88126566,- | |id=chr10:88126541..88126566,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.28e-18;82!UBERON:0002532;8.81e-08;206!UBERON:0010316;8.81e-08;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-46!115;UBERON:0001017!3.30e-41!82;UBERON:0001049!1.04e-39!57;UBERON:0005068!1.04e-39!57;UBERON:0006241!1.04e-39!57;UBERON:0007135!1.04e-39!57;UBERON:0005743!2.80e-39!86;UBERON:0000073!2.57e-38!94;UBERON:0001016!2.57e-38!94;UBERON:0000955!1.03e-35!69;UBERON:0006238!1.03e-35!69;UBERON:0002616!2.44e-34!59;UBERON:0003080!3.11e-31!42;UBERON:0002780!9.22e-31!41;UBERON:0001890!9.22e-31!41;UBERON:0006240!9.22e-31!41;UBERON:0003075!3.33e-28!86;UBERON:0007284!3.33e-28!86;UBERON:0002346!9.39e-28!90;UBERON:0001893!8.93e-27!34;UBERON:0002020!1.37e-26!34;UBERON:0003528!1.37e-26!34;UBERON:0002791!6.93e-26!33;UBERON:0001869!6.38e-25!32;UBERON:0000924!5.88e-21!173;UBERON:0006601!5.88e-21!173;UBERON:0004121!6.62e-21!169;UBERON:0003056!2.74e-20!61;UBERON:0000153!4.32e-20!129;UBERON:0007811!4.32e-20!129;UBERON:0002619!4.35e-20!22;UBERON:0000033!1.49e-19!123;UBERON:0000956!5.48e-19!25;UBERON:0000203!5.48e-19!25;UBERON:0001950!2.11e-18!20;UBERON:0000062!3.00e-11!511;UBERON:0000481!9.02e-10!347;UBERON:0003076!1.61e-09!15;UBERON:0003057!1.61e-09!15;UBERON:0002308!4.38e-09!9;UBERON:0000125!4.38e-09!9;UBERON:0002420!4.62e-09!9;UBERON:0007245!4.62e-09!9;UBERON:0010009!4.62e-09!9;UBERON:0010011!4.62e-09!9;UBERON:0000454!4.62e-09!9;UBERON:0000064!7.76e-09!219;UBERON:0000475!2.67e-08!365;UBERON:0004732!3.79e-08!13;UBERON:0000468!5.92e-08!659;UBERON:0000477!8.53e-08!286;UBERON:0001871!1.10e-07!7;UBERON:0002298!1.43e-07!8;UBERON:0009663!1.70e-07!7;UBERON:0000922!1.86e-07!612;UBERON:0004733!2.69e-07!12;UBERON:0002028!2.69e-07!12;UBERON:0007277!2.69e-07!12;UBERON:0005409!6.04e-07!35;UBERON:0000467!8.42e-07!625;UBERON:0000025!8.56e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.15e-34;34!UBERON:0003528;7.92e-34;34!UBERON:0002020;7.92e-34;34!UBERON:0002791;1.51e-33;32!UBERON:0001869;1.83e-33;32!UBERON:0002619;2.49e-32;22!UBERON:0002780;3.27e-31;41!UBERON:0001890;3.27e-31;41!UBERON:0001950;1.57e-29;20!UBERON:0000073;2.70e-28;53!UBERON:0002616;2.70e-28;53!UBERON:0000956;1.33e-27;25!UBERON:0000203;1.33e-27;25!UBERON:0001017;7.72e-24;75!UBERON:0001016;7.63e-22;83!UBERON:0000955;2.68e-21;68!UBERON:0000125;4.75e-14;9!UBERON:0002308;4.75e-14;9!UBERON:0002420;4.93e-14;9!UBERON:0007245;4.93e-14;9!UBERON:0010009;4.93e-14;9!UBERON:0010011;4.93e-14;9!UBERON:0000454;4.93e-14;9!UBERON:0007023;1.30e-12;114!UBERON:0009663;1.91e-11;7!UBERON:0001871;1.61e-10;6!UBERON:0004732;5.26e-10;13!UBERON:0000200;1.58e-09;6!UBERON:0002298;2.52e-09;6!UBERON:0011216;3.88e-09;132!UBERON:0004733;1.10e-08;12!UBERON:0002028;1.10e-08;12!UBERON:0001872;1.12e-08;5!UBERON:0000349;1.79e-08;5!UBERON:0002021;2.81e-08;5!UBERON:0000922;1.56e-07;49!UBERON:0000369;4.06e-07;4!UBERON:0002435;4.06e-07;4!UBERON:0000204;4.06e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.11e-56,89;UBERON:0001017,5.58e-56,81;UBERON:0001049,1.57e-54,56;UBERON:0005068,1.57e-54,56;UBERON:0006241,1.57e-54,56;UBERON:0007135,1.57e-54,56;UBERON:0000073,1.50e-50,53;UBERON:0002616,1.50e-50,53;UBERON:0007023,3.63e-50,114;UBERON:0000955,4.11e-49,68;UBERON:0006238,4.11e-49,68;UBERON:0002780,3.31e-43,41;UBERON:0001890,3.31e-43,41;UBERON:0003080,3.31e-43,41;UBERON:0006240,3.31e-43,41;UBERON:0001893,2.38e-40,34;UBERON:0003528,4.73e-40,34;UBERON:0002020,4.73e-40,34;UBERON:0003075,2.94e-38,82;UBERON:0007284,2.94e-38,82;UBERON:0002791,2.38e-37,32;UBERON:0001869,2.68e-37,32;UBERON:0002346,4.00e-37,86;UBERON:0002619,2.94e-32,22;UBERON:0004121,5.34e-30,171;UBERON:0000924,5.34e-30,171;UBERON:0006601,5.34e-30,171;UBERON:0010371,6.55e-30,104;UBERON:0003056,1.01e-29,61;UBERON:0001950,1.86e-29,20;UBERON:0000956,1.53e-27,25;UBERON:0000203,1.53e-27,25;UBERON:0011216,2.50e-27,223;UBERON:0010314,5.64e-26,132;UBERON:0000125,5.22e-14,9;UBERON:0002308,5.22e-14,9;UBERON:0002420,5.70e-14,9;UBERON:0007245,5.70e-14,9;UBERON:0010009,5.70e-14,9;UBERON:0010011,5.70e-14,9;UBERON:0000454,5.70e-14,9;UBERON:0000025,1.56e-13,192;UBERON:0004111,3.14e-12,240;UBERON:0003076,3.16e-12,15;UBERON:0003057,3.16e-12,15;UBERON:0009663,2.18e-11,7;UBERON:0001871,2.07e-10,6;UBERON:0004732,4.89e-10,13;UBERON:0000200,1.61e-09,6;UBERON:0002298,2.52e-09,6;UBERON:0004733,1.02e-08,12;UBERON:0002028,1.02e-08,12;UBERON:0007277,1.02e-08,12;UBERON:0001872,1.03e-08,5;UBERON:0000349,1.83e-08,5;UBERON:0002021,2.81e-08,5;UBERON:0000483,5.69e-08,306;UBERON:0000119,1.03e-07,309;UBERON:0000369,4.46e-07,4;UBERON:0002435,4.46e-07,4;UBERON:0000204,4.46e-07,4;UBERON:0010082,4.46e-07,4;UBERON:0000922,4.65e-07,592 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0.572471974262113,0.273748850145768,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22895262313288,0,0,4.71524671791765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0,0,0.300476117813194,0,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0,0.504867548488229,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,1.28648187638577,0,0,0,0.709840800239063,0.842923450390509,0.964044119533928,1.10293972732394,0.217879444092406,0.71181185733329,0.808987848960987,0.588664395376038,0.769494313892781,0,0,0,1.47008711385542,0,0.982827216677626,0,0,6.3953988042419,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.34779121492523,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,2.41151501647669,1.74306691720059,0.299918973546171,0,0,0,0.718874566474748,0,0,0,0,0,0,0,0,0,3.81141936333695,6.50699269288109,3.09315525111078,6.70065061337395,0.637938751653163,0.749007023947182,2.99161459204025,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.512556597022804,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,5.438675231623,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0,0,0,12.5122381184237,0,0,0,0,0.318852545457645,0,0,0,0,0.280797178113459,0,1.72347885350326,0,0,0.1605880751037,0.80719882876419,0,1.37402137902306,0,0,0,0,0,0,0.270455678475983,0,0,0,0.879049075631364,0.121360521749513,0,0.568272293612826,0,0,0,9.94147647766298,18.0056853005456,0.333926115068718,0,0,1.79323189425963,0.828851746593443,0,2.0453736500431,0,0,0,0,0,1.38100767891707,0,0,19.3866549219044,12.9875337426592,33.934345660203,0,0.0874599999961957,1.44999915086959,0,0,0,1.03423011972439,0,3.99337488346572,9.74315524395223,17.0040978461825,1.52581736317083,5.97128003628613,8.27533333069933,5.70402032600329,0.10893846351899,0,6.69467248983034,2.39278317278703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,1.97894300007517,1.94749775767882,0,0.530745387020035,1.83309043480088,0.296521128680622,0.123563938946503,0.313265848516366,29.7913007774593,1.60515529459758,15.4614534178724,0,0.19566461893209,2.42780379534093,1.57833761139756,1.20990716048664,22.6493843606563,3.03295582216742,1.20258735531594,3.00695755052017,0.664653872707185,3.30991955875499,0.313932918407225,1.19472429772959,0,0,0,0,0,1.92199335066233,0,0.387025325156341,0.292357268344742,0.0821154570532092,0.678923115418936,2.38291542067051,2.03382666702479,1.50746117111426,0,16.6507393363961,1.56441106187842,1.52301758477914,1.49417096317547,0.599428828746391,0.144090417154106,0.458146384663663,0,0,0,0,4.07712618220842,5.54395085455366,0,0,19.2134492387133,18.6191315293111,0,0,0,0.279282401272254,2.97908551215189,0,1.99679000498991,2.57535628881943,0.669514372325618,7.05426461110626,0,0,0,0,0,1.37798474120648,0,15.1093641063768,19.88569729229,0,0,0.415440338029185,0,0,20.1688528104642,0.670869375198532,0.315222829196793,1.25891011523995,0.211200673038813,0.179287339332845,2.30298236783334,1.42939065274673,0,0,0.542999601753713,0,0.653174720218818,0,0,0.170388021785422,0,0.293104467356165,0,14.7382570252168,15.4712144038947,0.342173675768659,0,1.38823636338003,4.87333345808964,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,7.97461361970287,14.0330204637258,14.1465751698345,6.30750115259078,11.3147632567589,18.6910172853564,2.35192679391592,0,0,0.856396000634902,0,0,1.7390523433299,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.643324774124777,1.04397716786085,0.453411851024545,0,0,0,3.08801447160972,0,0.883445729729405,0,0,1.79369063011563,4.14516410077438,0.303859956177382,15.2084279766904,0,0,0.327130788511688,0,0,0,0,13.4431579414618,0,0,0,0,1.24415452006595,2.04630994085843,5.714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| ||
|short_description=p1@GRID1 | |short_description=p1@GRID1 | ||
}} | }} |
Latest revision as of 17:23, 19 September 2015
Short description: | p1@GRID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRID1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -291bp_to_ENST00000464741, NM_017551, uc001kdl.1, uc009xsu.1_5end |
EntrezGene: | GRID1 |
HGNC: | 4575 |
UniProt: | G3V186A8KAN9Q9ULK0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data