FFCP PHASE1:Hg19::chrX:13956948..13956957,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4461 | |||
|TSSclassifier=strong | |||
|UniProt=Q13491 | |||
|association_with_transcript=-117bp_to_NM_001001994,uc004cvx.2,uc004cwa.2_5end | |||
|cluster_id=chrX:13956948..13956957,- | |||
|description=CAGE_peak_11_at_GPM6B_5end | |||
|id=chrX:13956948..13956957,- | |||
|ontology_enrichment_celltype=CL:0000047!7.10e-13!8;CL:0002319!2.47e-12!25;CL:0000133!1.66e-10!59;CL:0000540!6.44e-10!6;CL:0000031!6.44e-10!6;CL:0000404!6.44e-10!6;CL:0002322!3.00e-09!5;CL:0000221!2.64e-08!71;CL:0000148!4.98e-07!10;CL:0000541!4.98e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.03e-21;5!CL:0000540;1.70e-16;6!CL:0000404;1.70e-16;6!CL:0002319;8.72e-13;25!CL:0000047;3.06e-09;2!CL:0002367;1.49e-08;2!CL:0002321;8.52e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.65e-24,8;CL:0002322,4.17e-21,5;CL:0000540,1.51e-16,6;CL:0000031,1.51e-16,6;CL:0000404,1.51e-16,6;CL:0002319,1.09e-12,25;CL:0000133,1.22e-09,59;CL:0002367,1.24e-08,2;CL:0000221,2.03e-07,72;CL:0000148,9.20e-07,10;CL:0000541,9.20e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.70e-16;6!CL:0000133;1.11e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.49e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.68e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.47e-47!82;UBERON:0005743!1.49e-45!86;UBERON:0000073!1.37e-42!94;UBERON:0001016!1.37e-42!94;UBERON:0001049!1.37e-38!57;UBERON:0005068!1.37e-38!57;UBERON:0006241!1.37e-38!57;UBERON:0007135!1.37e-38!57;UBERON:0003075!8.97e-33!86;UBERON:0007284!8.97e-33!86;UBERON:0002616!1.03e-32!59;UBERON:0000955!1.30e-31!69;UBERON:0006238!1.30e-31!69;UBERON:0002346!1.45e-30!90;UBERON:0004121!1.81e-30!169;UBERON:0000924!3.11e-29!173;UBERON:0006601!3.11e-29!173;UBERON:0001893!4.89e-27!34;UBERON:0002780!7.13e-27!41;UBERON:0001890!7.13e-27!41;UBERON:0006240!7.13e-27!41;UBERON:0002020!7.29e-27!34;UBERON:0003528!7.29e-27!34;UBERON:0003080!5.34e-26!42;UBERON:0002791!5.59e-26!33;UBERON:0000033!1.27e-24!123;UBERON:0001869!1.31e-24!32;UBERON:0003056!3.94e-24!61;UBERON:0000153!1.49e-23!129;UBERON:0007811!1.49e-23!129;UBERON:0000956!9.44e-19!25;UBERON:0000203!9.44e-19!25;UBERON:0007023!7.93e-18!115;UBERON:0002619!2.86e-15!22;UBERON:0003076!9.97e-14!15;UBERON:0003057!9.97e-14!15;UBERON:0001950!6.34e-13!20;UBERON:0004733!3.24e-10!12;UBERON:0002028!3.24e-10!12;UBERON:0007277!3.24e-10!12;UBERON:0000475!6.62e-10!365;UBERON:0002308!1.19e-09!9;UBERON:0000125!1.19e-09!9;UBERON:0004732!3.06e-09!13;UBERON:0000119!1.68e-08!312;UBERON:0002298!4.11e-08!8;UBERON:0000483!6.33e-08!309;UBERON:0002420!1.37e-07!9;UBERON:0007245!1.37e-07!9;UBERON:0010009!1.37e-07!9;UBERON:0010011!1.37e-07!9;UBERON:0000454!1.37e-07!9;UBERON:0009663!1.77e-07!7;UBERON:0002680!5.05e-07!9;UBERON:0001895!5.05e-07!9;UBERON:0010092!5.05e-07!9;UBERON:0000064!5.08e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.81e-23;34!UBERON:0002020;1.81e-23;34!UBERON:0001893;2.03e-22;34!UBERON:0001869;8.03e-22;32!UBERON:0002791;4.14e-21;32!UBERON:0000956;4.09e-19;25!UBERON:0000203;4.09e-19;25!UBERON:0002780;1.88e-16;41!UBERON:0001890;1.88e-16;41!UBERON:0002619;4.31e-15;22!UBERON:0000073;1.16e-14;53!UBERON:0002616;1.16e-14;53!UBERON:0001950;1.44e-13;20!UBERON:0001017;1.11e-12;75!UBERON:0000955;3.10e-10;68!UBERON:0001016;1.80e-09;83!UBERON:0001871;3.86e-09;6!UBERON:0005969;1.49e-08;2!UBERON:0003956;1.49e-08;2!UBERON:0001872;1.11e-07;5!UBERON:0000922;4.08e-07;49!UBERON:0002420;4.46e-07;9!UBERON:0000125;4.46e-07;9!UBERON:0007245;4.46e-07;9!UBERON:0002308;4.46e-07;9!UBERON:0010009;4.46e-07;9!UBERON:0010011;4.46e-07;9!UBERON:0000454;4.46e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.54e-35,81;UBERON:0001016,1.14e-30,89;UBERON:0001049,2.93e-27,56;UBERON:0005068,2.93e-27,56;UBERON:0006241,2.93e-27,56;UBERON:0007135,2.93e-27,56;UBERON:0000073,3.29e-26,53;UBERON:0002616,3.29e-26,53;UBERON:0001893,2.32e-24,34;UBERON:0003528,2.70e-24,34;UBERON:0002020,2.70e-24,34;UBERON:0002791,9.10e-23,32;UBERON:0001869,9.10e-23,32;UBERON:0002780,1.54e-22,41;UBERON:0001890,1.54e-22,41;UBERON:0003080,1.54e-22,41;UBERON:0006240,1.54e-22,41;UBERON:0000955,4.90e-21,68;UBERON:0006238,4.90e-21,68;UBERON:0003075,9.17e-21,82;UBERON:0007284,9.17e-21,82;UBERON:0002346,1.54e-19,86;UBERON:0000956,9.06e-19,25;UBERON:0000203,9.06e-19,25;UBERON:0010371,2.54e-18,104;UBERON:0003056,7.63e-18,61;UBERON:0004121,1.16e-17,171;UBERON:0000924,1.16e-17,171;UBERON:0006601,1.16e-17,171;UBERON:0002619,8.07e-15,22;UBERON:0001950,3.17e-13,20;UBERON:0010314,8.18e-11,132;UBERON:0011216,5.58e-10,223;UBERON:0001871,7.93e-09,6;UBERON:0005969,1.24e-08,2;UBERON:0003956,1.24e-08,2;UBERON:0001872,1.18e-07,5;UBERON:0000125,5.72e-07,9;UBERON:0002308,5.72e-07,9;UBERON:0002420,6.10e-07,9;UBERON:0007245,6.10e-07,9;UBERON:0010009,6.10e-07,9;UBERON:0010011,6.10e-07,9;UBERON:0000454,6.10e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.861847406537515,0,0,2.0036519099174,1.23186982565596,0.376627918784408,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0.298897361103602,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0.309977343527296,0,0,0,0,0.505008341862199,0.625592599359821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26907971453584,4.10842281796604,4.29917588617218,2.798848485415,2.52320850875628,3.28479623168247,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,0,0,0,0.616964956219941,0.300343057843917,1.71495859578347,0.224262168690721,0,0.2933531432838,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,2.54094624222463,2.60279707715243,1.54657762555539,0.837581326671744,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,1.13841952129715,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,1.1253553312841,0,0,0.211125408127993,0,0,0,1.02268682502155,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,1.20596438625408,1.52581736317083,0.331737779793674,0.295547618953547,0.87754158861589,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41542379259422,0,0.937057782901357,0,0,0,0,0,4.28501866282686,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.00210144354895,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0.953423842781029,3.21506296930038,5.22649859069488,1.24632101408756,0,0,0.668245123238271,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,1.09823638411767,0,1.14681839138014,0.110929051536852,1.30402446176905,0.276697269872462,0,1.51649117541648,1.14186133417987,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.873677105536111,0,0,0,0,0,0.315446980005013,0,0,0,0.963438376446893,0,0.159633859057151,0.615349092722265,2.52071696221718,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.540300676947157,1.56215619722769,0,0.887821342714695,4.37579847214576,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.679697329768317,1.05236437700559,0,0,0.078493092850514,1.25692471932802,0,0,0,0,0.285906176706625,0.158013611732727,0,0.695433089210318,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.596852325484105,0,0,1.8689887846723,0.301925687133347,0,0,0,0,0,1.76677620403451,0.594092800654172,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.860037498908708,0.946629373159108,1.08786384305464,4.36350690340377,0,0,0,0,0.883164973845552,1.31118686356435,0,1.52983244612973,2.13773924212448,0.735159196278759,1.50424523575425,0.151557396436479,0,3.31667775783512,0.930896962757057,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@GPM6B | |||
}} |
Latest revision as of 17:28, 19 September 2015
Short description: | p11@GPM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GPM6B_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_NM_001001994, uc004cvx.2, uc004cwa.2_5end |
EntrezGene: | GPM6B |
HGNC: | 4461 |
UniProt: | Q13491 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.65e-24 | 8 |
embryonic stem cell | 4.17e-21 | 5 |
neuron | 1.51e-16 | 6 |
neuroblast | 1.51e-16 | 6 |
electrically signaling cell | 1.51e-16 | 6 |
neural cell | 1.09e-12 | 25 |
neurectodermal cell | 1.22e-09 | 59 |
trabecular meshwork cell | 1.24e-08 | 2 |
ectodermal cell | 2.03e-07 | 72 |
melanocyte | 9.20e-07 | 10 |
melanoblast | 9.20e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.68e-08 | 2 |