FFCP PHASE1:Hg19::chr5:111092930..111092941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9315 | |EntrezGene=9315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16834 | |HGNC=16834 | ||
|TSSclassifier=strong | |||
|UniProt=Q16612 | |UniProt=Q16612 | ||
|association_with_transcript=3bp_to_NM_004772,uc003kpk.2,uc003kpm.2_5end | |association_with_transcript=3bp_to_NM_004772,uc003kpk.2,uc003kpm.2_5end | ||
|cluster_id=chr5:111092930..111092941,- | |||
|coexpression_cluster_id=C4449 | |||
|description=CAGE_peak_7_at_C5orf13_5end | |description=CAGE_peak_7_at_C5orf13_5end | ||
|id=chr5:111092930..111092941,- | |id=chr5:111092930..111092941,- | ||
|ontology_enrichment_celltype=CL:0002319!9.75e-07!25 | |ontology_enrichment_celltype=CL:0002319!9.75e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.10e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.20e-08,25;CL:0000047,1.36e-07,8;CL:0000133,6.09e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.84e-21!82;UBERON:0005743!9.02e-21!86;UBERON:0000073!5.16e-20!94;UBERON:0001016!5.16e-20!94;UBERON:0000955!7.71e-16!69;UBERON:0006238!7.71e-16!69;UBERON:0000924!2.69e-15!173;UBERON:0006601!2.69e-15!173;UBERON:0004121!7.95e-15!169;UBERON:0001049!1.32e-12!57;UBERON:0005068!1.32e-12!57;UBERON:0006241!1.32e-12!57;UBERON:0007135!1.32e-12!57;UBERON:0002616!2.05e-12!59;UBERON:0002346!2.01e-11!90;UBERON:0000956!4.66e-11!25;UBERON:0000203!4.66e-11!25;UBERON:0003075!5.15e-11!86;UBERON:0007284!5.15e-11!86;UBERON:0001950!6.09e-11!20;UBERON:0002619!1.27e-10!22;UBERON:0000033!1.43e-10!123;UBERON:0000153!1.70e-10!129;UBERON:0007811!1.70e-10!129;UBERON:0001893!3.98e-10!34;UBERON:0001869!4.17e-10!32;UBERON:0002791!1.25e-09!33;UBERON:0002780!1.99e-09!41;UBERON:0001890!1.99e-09!41;UBERON:0006240!1.99e-09!41;UBERON:0002020!2.67e-09!34;UBERON:0003528!2.67e-09!34;UBERON:0003080!9.16e-09!42;UBERON:0000468!3.71e-08!659;UBERON:0003056!8.53e-08!61;UBERON:0007023!1.79e-07!115;UBERON:0000475!6.59e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.70e-13;20!UBERON:0000956;5.47e-13;25!UBERON:0000203;5.47e-13;25!UBERON:0002619;3.23e-12;22!UBERON:0001869;2.21e-10;32!UBERON:0001893;5.92e-10;34!UBERON:0000922;1.65e-09;49!UBERON:0002791;3.67e-09;32!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0001017;1.69e-08;75!UBERON:0001016;2.52e-08;83!UBERON:0000955;2.72e-08;68!UBERON:0000073;3.96e-08;53!UBERON:0002616;3.96e-08;53!UBERON:0002780;5.54e-08;41!UBERON:0001890;5.54e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.86e-25,81;UBERON:0001016,1.46e-24,89;UBERON:0000955,3.02e-18,68;UBERON:0006238,3.02e-18,68;UBERON:0004121,9.77e-18,171;UBERON:0000924,9.77e-18,171;UBERON:0006601,9.77e-18,171;UBERON:0001049,2.18e-14,56;UBERON:0005068,2.18e-14,56;UBERON:0006241,2.18e-14,56;UBERON:0007135,2.18e-14,56;UBERON:0000073,9.35e-14,53;UBERON:0002616,9.35e-14,53;UBERON:0002346,3.11e-13,86;UBERON:0001950,5.56e-13,20;UBERON:0000956,1.30e-12,25;UBERON:0000203,1.30e-12,25;UBERON:0003075,1.86e-12,82;UBERON:0007284,1.86e-12,82;UBERON:0002619,5.44e-12,22;UBERON:0011216,1.41e-11,223;UBERON:0001869,5.72e-11,32;UBERON:0001893,8.84e-11,34;UBERON:0002780,1.21e-10,41;UBERON:0001890,1.21e-10,41;UBERON:0003080,1.21e-10,41;UBERON:0006240,1.21e-10,41;UBERON:0010371,3.38e-10,104;UBERON:0002791,9.66e-10,32;UBERON:0003528,2.35e-09,34;UBERON:0002020,2.35e-09,34;UBERON:0003056,9.27e-09,61;UBERON:0010314,2.92e-08,132 | |||
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| ||
|short_description=p7@C5orf13 | |short_description=p7@C5orf13 | ||
}} | }} |
Latest revision as of 17:32, 19 September 2015
Short description: | p7@C5orf13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C5orf13_5end |
Coexpression cluster: | C4449_brain_temporal_occipital_cerebellum_duodenum_Neurons_parietal |
Association with transcript: | 3bp_to_NM_004772, uc003kpk.2, uc003kpm.2_5end |
EntrezGene: | C5orf13 |
HGNC: | 16834 |
UniProt: | Q16612 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.20e-08 | 25 |
neuronal stem cell | 1.36e-07 | 8 |
neurectodermal cell | 6.09e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.86e-25 | 81 |
nervous system | 1.46e-24 | 89 |
brain | 3.02e-18 | 68 |
future brain | 3.02e-18 | 68 |
ectoderm-derived structure | 9.77e-18 | 171 |
ectoderm | 9.77e-18 | 171 |
presumptive ectoderm | 9.77e-18 | 171 |
neural tube | 2.18e-14 | 56 |
neural rod | 2.18e-14 | 56 |
future spinal cord | 2.18e-14 | 56 |
neural keel | 2.18e-14 | 56 |
regional part of nervous system | 9.35e-14 | 53 |
regional part of brain | 9.35e-14 | 53 |
neurectoderm | 3.11e-13 | 86 |
neocortex | 5.56e-13 | 20 |
cerebral cortex | 1.30e-12 | 25 |
pallium | 1.30e-12 | 25 |
neural plate | 1.86e-12 | 82 |
presumptive neural plate | 1.86e-12 | 82 |
regional part of cerebral cortex | 5.44e-12 | 22 |
organ system subdivision | 1.41e-11 | 223 |
cerebral hemisphere | 5.72e-11 | 32 |
telencephalon | 8.84e-11 | 34 |
regional part of forebrain | 1.21e-10 | 41 |
forebrain | 1.21e-10 | 41 |
anterior neural tube | 1.21e-10 | 41 |
future forebrain | 1.21e-10 | 41 |
ecto-epithelium | 3.38e-10 | 104 |
regional part of telencephalon | 9.66e-10 | 32 |
brain grey matter | 2.35e-09 | 34 |
gray matter | 2.35e-09 | 34 |
pre-chordal neural plate | 9.27e-09 | 61 |
structure with developmental contribution from neural crest | 2.92e-08 | 132 |