FFCP PHASE1:Hg19::chr14:32902600..32902611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9472 | |EntrezGene=9472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=376 | |HGNC=376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=230bp_to_ENST00000554449_5end | |association_with_transcript=230bp_to_ENST00000554449_5end | ||
|cluster_id=chr14:32902600..32902611,+ | |||
|coexpression_cluster_id=C179 | |coexpression_cluster_id=C179 | ||
|description=CAGE_peak_13_at_AKAP6_5end | |description=CAGE_peak_13_at_AKAP6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!2.17e-26!14;CL:0000945!2.76e-26!24;CL:0000826!2.76e-26!24;CL:0000838!1.45e-11!52;CL:0000542!2.85e-11!53;CL:0000051!2.85e-11!53 | |ontology_enrichment_celltype=CL:0000236!2.17e-26!14;CL:0000945!2.76e-26!24;CL:0000826!2.76e-26!24;CL:0000838!1.45e-11!52;CL:0000542!2.85e-11!53;CL:0000051!2.85e-11!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.62e-76;13!CL:0000945;1.20e-50;24!CL:0000542;1.65e-17;53!CL:0000222;1.18e-13;1 | |ontology_enrichment_celltype_v019=CL:0000236;1.62e-76;13!CL:0000945;1.20e-50;24!CL:0000542;1.65e-17;53!CL:0000222;1.18e-13;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,7.04e-71,14;CL:0000945,1.48e-50,24;CL:0000826,1.48e-50,24;CL:0000838,8.88e-23,52;CL:0000542,2.50e-22,53;CL:0000051,2.50e-22,53;CL:0002087,1.48e-09,115;CL:0002031,4.15e-09,120;CL:0000738,6.77e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.65e-17;53!UBERON:0006965;1.16e-07;2 | |ontology_enrichment_development_v019=CL:0000051;1.65e-17;53!UBERON:0006965;1.16e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.18e-13;1!DOID:0050177;1.18e-13;1!DOID:0050427;1.18e-13;1!DOID:2513;1.18e-13;1!DOID:3451;1.81e-07;2!DOID:4159;1.81e-07;2!DOID:0060122;1.81e-07;2 | |ontology_enrichment_disease_v019=DOID:630;1.18e-13;1!DOID:0050177;1.18e-13;1!DOID:0050427;1.18e-13;1!DOID:2513;1.18e-13;1!DOID:3451;1.81e-07;2!DOID:4159;1.81e-07;2!DOID:0060122;1.81e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2513,6.65e-14,1;DOID:630,1.25e-13,1;DOID:0050177,1.25e-13,1;DOID:0050427,1.25e-13,1;DOID:3451,1.36e-07,2;DOID:4159,1.36e-07,2;DOID:0060122,1.36e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.46e-32!115;UBERON:0001896!4.45e-09!3;UBERON:0005290!4.45e-09!3;UBERON:0010096!4.45e-09!3 | |ontology_enrichment_uberon=UBERON:0007023!3.46e-32!115;UBERON:0001896!4.45e-09!3;UBERON:0005290!4.45e-09!3;UBERON:0010096!4.45e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001255;1.81e-07;2!UBERON:0001556;1.81e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001255;1.81e-07;2!UBERON:0001556;1.81e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,1.45e-07,2;UBERON:0001556,1.45e-07,2 | |||
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| ||
|short_description=p13@AKAP6 | |short_description=p13@AKAP6 | ||
}} | }} |
Latest revision as of 17:40, 19 September 2015
Short description: | p13@AKAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_AKAP6_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | 230bp_to_ENST00000554449_5end |
EntrezGene: | AKAP6 |
HGNC: | 376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 7.04e-71 | 14 |
lymphocyte of B lineage | 1.48e-50 | 24 |
pro-B cell | 1.48e-50 | 24 |
lymphoid lineage restricted progenitor cell | 8.88e-23 | 52 |
lymphocyte | 2.50e-22 | 53 |
common lymphoid progenitor | 2.50e-22 | 53 |
nongranular leukocyte | 1.48e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.15e-09 | 120 |
leukocyte | 6.77e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
urinary bladder | 1.45e-07 | 2 |
lower urinary tract | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.65e-14 | 1 |
genetic disease | 1.25e-13 | 1 |
monogenic disease | 1.25e-13 | 1 |
xeroderma pigmentosum | 1.25e-13 | 1 |
skin carcinoma | 1.36e-07 | 2 |
skin cancer | 1.36e-07 | 2 |
integumentary system cancer | 1.36e-07 | 2 |