FFCP PHASE1:Hg19::chr17:35981246..35981250,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20038 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-28bp_to_AK025721_5end | |||
|cluster_id=chr17:35981246..35981250,- | |||
|description=CAGE_peak_3_at_DDX52_5end | |||
|id=chr17:35981246..35981250,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.18e-34;1!CL:0000159;5.96e-18;2!CL:0000306;1.50e-09;4!CL:0002222;1.50e-09;4!CL:0002224;1.50e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.84e-34,1;CL:0000159,5.48e-18,2;CL:0000306,1.70e-09,4;CL:0002222,1.70e-09,4;CL:0002224,1.70e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.70e-08!239;DOID:162!2.66e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.18e-34;1!DOID:154;9.86e-18;2!DOID:4236;9.86e-18;2!DOID:4468;9.86e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.84e-34,1;DOID:4468,9.07e-18,2;DOID:154,1.07e-17,2;DOID:4236,1.07e-17,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.18e-34;1!UBERON:0004909;5.96e-18;2!UBERON:0010077;1.50e-09;4!UBERON:0005389;1.50e-09;4!UBERON:0000484;1.50e-09;4!UBERON:0000965;1.50e-09;4!UBERON:0001803;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.84e-34,1;UBERON:0004909,5.48e-18,2;UBERON:0010077,1.70e-09,4;UBERON:0005389,1.70e-09,4;UBERON:0000484,1.70e-09,4;UBERON:0002546,1.70e-09,4;UBERON:0000965,1.70e-09,4;UBERON:0001803,1.70e-09,4;UBERON:0003073,1.70e-09,4;UBERON:0005426,1.70e-09,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0.117408694235822,0.288732895522148,0,0.951270761172991,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0.120859449591622,0.40101294060657,0.184161977871793,0.229628896329213,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0,0,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,0,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.445234820091624,0.16480387422676,0.211125408127993,0.398495976502139,0,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0.225595660617181,0,0.335643173951685,0.37950746544837,0.317873157960757,1.47698645169619,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0.242780379534093,0,2.41981432097328,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0.0979923974143777,0,0,0,0.290268993867255,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0.124252535565433,0,0.407712618220842,0.209205692624666,0.203996435272644,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0.136203406111576,0.321506296930038,0,0.83088067605837,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0.326587360109409,1.19730191562487,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0,0,0,0.477890301491107,0,0,0.414706207840855,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0.260994291965212,0.226705925512272,0,0.244736704506468,0.537266523244462,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,1.31043939538565,0.245772908753719,0,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0,0.471797825567689,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,2.68453036314702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0.299823467774787,0,0.352894871715692,0.160482733378337,0,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| |||
|short_description=p3@DDX52 | |||
}} |
Latest revision as of 18:16, 19 September 2015
Short description: | p3@DDX52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DDX52_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_AK025721_5end |
EntrezGene: | DDX52 |
HGNC: | 20038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
crystallin accumulating cell | 1.70e-09 | 4 |
vertebrate lens cell | 1.70e-09 | 4 |
lens epithelial cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.84e-34 | 1 |
epithelium of gonad | 5.48e-18 | 2 |
cuboidal epithelium | 1.70e-09 | 4 |
transparent eye structure | 1.70e-09 | 4 |
simple cuboidal epithelium | 1.70e-09 | 4 |
cranial placode | 1.70e-09 | 4 |
lens of camera-type eye | 1.70e-09 | 4 |
epithelium of lens | 1.70e-09 | 4 |
lens placode | 1.70e-09 | 4 |
lens vesicle | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.84e-34 | 1 |
clear cell adenocarcinoma | 9.07e-18 | 2 |
mixed cell type cancer | 1.07e-17 | 2 |
carcinosarcoma | 1.07e-17 | 2 |