FFCP PHASE1:Hg19::chr17:36003553..36003559,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11056 | |EntrezGene=11056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20038 | |HGNC=20038 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2R4,Q59H21 | |UniProt=Q9Y2R4,Q59H21 | ||
|association_with_transcript=-60bp_to_ENST00000349699,NM_007010_5end | |association_with_transcript=-60bp_to_ENST00000349699,NM_007010_5end | ||
|cluster_id=chr17:36003553..36003559,- | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_6_at_DDX52_5end | |description=CAGE_peak_6_at_DDX52_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000159!7.88e-15!2;CL:0000313!2.70e-08!1;CL:0000319!3.10e-08!1 | |ontology_enrichment_celltype=CL:0000159!7.88e-15!2;CL:0000313!2.70e-08!1;CL:0000319!3.10e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000159;2.34e-79;2!CL:0000313;6.62e-41;1!CL:0000319;2.21e-40;1 | |ontology_enrichment_celltype_v019=CL:0000159;2.34e-79;2!CL:0000313;6.62e-41;1!CL:0000319;2.21e-40;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000159,1.56e-79,2;CL:0000313,6.62e-41,1;CL:0000319,1.48e-40,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.74e-09;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.74e-09;5 | ||
|ontology_enrichment_disease=DOID:2152!2.70e-08!1;DOID:3030!3.10e-08!1;DOID:3371!4.99e-08!1;DOID:4549!4.99e-08!1;DOID:5861!4.99e-08!1;DOID:6496!4.99e-08!1 | |ontology_enrichment_disease=DOID:2152!2.70e-08!1;DOID:3030!3.10e-08!1;DOID:3371!4.99e-08!1;DOID:4549!4.99e-08!1;DOID:5861!4.99e-08!1;DOID:6496!4.99e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;6.62e-41;1!DOID:3030;2.21e-40;1!DOID:299;2.28e-07;25 | |ontology_enrichment_disease_v019=DOID:2152;6.62e-41;1!DOID:3030;2.21e-40;1!DOID:299;2.28e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,6.62e-41,1;DOID:3030,1.48e-40,1;DOID:299,2.20e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004911!2.70e-08!1;UBERON:0006834!1.18e-07!1 | |ontology_enrichment_uberon=UBERON:0004911!2.70e-08!1;UBERON:0006834!1.18e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;6.62e-41;1!UBERON:0004909;3.11e-21;2!UBERON:0002046;2.74e-09;5!UBERON:0001871;6.04e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0004911;6.62e-41;1!UBERON:0004909;3.11e-21;2!UBERON:0002046;2.74e-09;5!UBERON:0001871;6.04e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.62e-41,1;UBERON:0004909,3.11e-21,2;UBERON:0002046,2.74e-09,5;UBERON:0004117,2.74e-09,5;UBERON:0007689,2.74e-09,5;UBERON:0007123,2.74e-09,5;UBERON:0003091,2.74e-09,5;UBERON:0001871,6.39e-07,6 | |||
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|short_description=p6@DDX52 | |short_description=p6@DDX52 | ||
}} | }} |
Latest revision as of 18:24, 19 September 2015
Short description: | p6@DDX52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DDX52_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -60bp_to_ENST00000349699, NM_007010_5end |
EntrezGene: | DDX52 |
HGNC: | 20038 |
UniProt: | Q9Y2R4Q59H21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 1.56e-79 | 2 |
serous secreting cell | 6.62e-41 | 1 |
mucus secreting cell | 1.48e-40 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.62e-41 | 1 |
epithelium of gonad | 3.11e-21 | 2 |
thyroid gland | 2.74e-09 | 5 |
pharyngeal pouch | 2.74e-09 | 5 |
thyroid diverticulum | 2.74e-09 | 5 |
pharyngeal pouch 2 | 2.74e-09 | 5 |
thyroid primordium | 2.74e-09 | 5 |
temporal lobe | 6.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.62e-41 | 1 |
mucinous adenocarcinoma | 1.48e-40 | 1 |
adenocarcinoma | 2.20e-07 | 25 |