FFCP PHASE1:Hg19::chr22:30987837..30987848,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23481 | |EntrezGene=23481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8848 | |HGNC=8848 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000335214_5end | |association_with_transcript=0bp_to_ENST00000335214_5end | ||
|cluster_id=chr22:30987837..30987848,- | |||
|description=CAGE_peak_2_at_PES1_5end | |description=CAGE_peak_2_at_PES1_5end | ||
|id=chr22:30987837..30987848,- | |id=chr22:30987837..30987848,- | ||
|ontology_enrichment_celltype=CL:0000012!2.30e-20!682;CL:0000548!3.05e-20!679;CL:0000004!3.05e-20!679;CL:0000255!3.05e-20!679;CL:0002321!4.33e-20!248;CL:0000220!1.06e-19!246;CL:0000144!4.04e-13!625;CL:0000055!1.25e-12!180;CL:0000066!1.35e-12!254;CL:0000003!5.35e-11!722;CL:0000222!2.41e-10!119;CL:0000393!3.54e-09!60;CL:0000211!3.54e-09!60;CL:0000680!2.55e-08!57;CL:0000056!2.55e-08!57;CL:0000355!2.55e-08!57;CL:0000192!3.72e-08!42;CL:0000514!3.72e-08!42;CL:0000359!4.48e-08!32;CL:0002371!6.14e-08!591;CL:0000187!1.29e-07!54;CL:0000183!4.26e-07!59 | |ontology_enrichment_celltype=CL:0000012!2.30e-20!682;CL:0000548!3.05e-20!679;CL:0000004!3.05e-20!679;CL:0000255!3.05e-20!679;CL:0002321!4.33e-20!248;CL:0000220!1.06e-19!246;CL:0000144!4.04e-13!625;CL:0000055!1.25e-12!180;CL:0000066!1.35e-12!254;CL:0000003!5.35e-11!722;CL:0000222!2.41e-10!119;CL:0000393!3.54e-09!60;CL:0000211!3.54e-09!60;CL:0000680!2.55e-08!57;CL:0000056!2.55e-08!57;CL:0000355!2.55e-08!57;CL:0000192!3.72e-08!42;CL:0000514!3.72e-08!42;CL:0000359!4.48e-08!32;CL:0002371!6.14e-08!591;CL:0000187!1.29e-07!54;CL:0000183!4.26e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.48e-08;32!CL:0000192;4.82e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.12e-18,250;CL:0000222,6.22e-10,121;CL:0000393,1.52e-09,61;CL:0000211,1.52e-09,61;CL:0000066,5.14e-09,253;CL:0000680,1.39e-08,58;CL:0000056,1.39e-08,58;CL:0000355,1.39e-08,58;CL:0000192,2.27e-08,43;CL:0000514,2.27e-08,43;CL:0000359,2.40e-08,32;CL:0000187,8.54e-08,55 | |||
|ontology_enrichment_development_v019=CL:0000514;4.82e-07;43 | |||
|ontology_enrichment_disease=DOID:162!7.36e-14!235;DOID:14566!3.08e-13!239;DOID:0050687!1.47e-07!143;DOID:0050686!8.43e-07!137 | |ontology_enrichment_disease=DOID:162!7.36e-14!235;DOID:14566!3.08e-13!239;DOID:0050687!1.47e-07!143;DOID:0050686!8.43e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.11e-10,235;DOID:14566,1.16e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.48e-10!42;UBERON:0003509!6.48e-10!42;UBERON:0004572!6.48e-10!42;UBERON:0000490!9.12e-09!138;UBERON:0001134!1.71e-07!61;UBERON:0002036!1.71e-07!61;UBERON:0003082!1.71e-07!61;UBERON:0004290!3.68e-07!70;UBERON:0004573!4.37e-07!33;UBERON:0004571!4.37e-07!33;UBERON:0002385!5.86e-07!63;UBERON:0001015!5.86e-07!63;UBERON:0000383!5.86e-07!63;UBERON:0002049!7.43e-07!79;UBERON:0007798!7.43e-07!79 | |ontology_enrichment_uberon=UBERON:0001637!6.48e-10!42;UBERON:0003509!6.48e-10!42;UBERON:0004572!6.48e-10!42;UBERON:0000490!9.12e-09!138;UBERON:0001134!1.71e-07!61;UBERON:0002036!1.71e-07!61;UBERON:0003082!1.71e-07!61;UBERON:0004290!3.68e-07!70;UBERON:0004573!4.37e-07!33;UBERON:0004571!4.37e-07!33;UBERON:0002385!5.86e-07!63;UBERON:0001015!5.86e-07!63;UBERON:0000383!5.86e-07!63;UBERON:0002049!7.43e-07!79;UBERON:0007798!7.43e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.79e-08;42!UBERON:0003509;4.79e-08;42!UBERON:0004572;4.79e-08;42!UBERON:0004573;2.64e-07;33!UBERON:0004571;2.64e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.77e-11,42;UBERON:0003509,4.77e-11,42;UBERON:0004572,4.77e-11,42;UBERON:0000490,4.40e-08,148;UBERON:0001134,7.14e-08,62;UBERON:0002036,7.14e-08,62;UBERON:0003082,7.14e-08,62;UBERON:0004573,8.74e-08,33;UBERON:0004571,8.74e-08,33;UBERON:0002329,1.92e-07,71;UBERON:0003059,1.92e-07,71;UBERON:0007282,1.92e-07,71;UBERON:0004290,1.92e-07,71;UBERON:0009618,1.92e-07,71;UBERON:0007524,2.13e-07,73;UBERON:0007500,3.54e-07,59;UBERON:0001981,3.54e-07,59;UBERON:0004537,3.54e-07,59;UBERON:0006965,3.54e-07,59;UBERON:0002385,3.64e-07,64;UBERON:0001015,3.64e-07,64;UBERON:0000383,3.64e-07,64;UBERON:0003077,4.01e-07,72;UBERON:0007285,4.01e-07,72;UBERON:0007503,4.26e-07,78;UBERON:0000055,6.51e-07,68;UBERON:0002049,8.88e-07,78;UBERON:0007798,8.88e-07,78 | |||
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| ||
|short_description=p2@PES1 | |short_description=p2@PES1 | ||
}} | }} |
Latest revision as of 18:33, 19 September 2015
Short description: | p2@PES1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PES1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000335214_5end |
EntrezGene: | PES1 |
HGNC: | 8848 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.12e-18 | 250 |
mesodermal cell | 6.22e-10 | 121 |
electrically responsive cell | 1.52e-09 | 61 |
electrically active cell | 1.52e-09 | 61 |
epithelial cell | 5.14e-09 | 253 |
muscle precursor cell | 1.39e-08 | 58 |
myoblast | 1.39e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-08 | 58 |
smooth muscle cell | 2.27e-08 | 43 |
smooth muscle myoblast | 2.27e-08 | 43 |
vascular associated smooth muscle cell | 2.40e-08 | 32 |
muscle cell | 8.54e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
artery | 4.77e-11 | 42 |
arterial blood vessel | 4.77e-11 | 42 |
arterial system | 4.77e-11 | 42 |
unilaminar epithelium | 4.40e-08 | 148 |
skeletal muscle tissue | 7.14e-08 | 62 |
striated muscle tissue | 7.14e-08 | 62 |
myotome | 7.14e-08 | 62 |
systemic artery | 8.74e-08 | 33 |
systemic arterial system | 8.74e-08 | 33 |
somite | 1.92e-07 | 71 |
presomitic mesoderm | 1.92e-07 | 71 |
presumptive segmental plate | 1.92e-07 | 71 |
dermomyotome | 1.92e-07 | 71 |
trunk paraxial mesoderm | 1.92e-07 | 71 |
dense mesenchyme tissue | 2.13e-07 | 73 |
epithelial tube open at both ends | 3.54e-07 | 59 |
blood vessel | 3.54e-07 | 59 |
blood vasculature | 3.54e-07 | 59 |
vascular cord | 3.54e-07 | 59 |
muscle tissue | 3.64e-07 | 64 |
musculature | 3.64e-07 | 64 |
musculature of body | 3.64e-07 | 64 |
paraxial mesoderm | 4.01e-07 | 72 |
presumptive paraxial mesoderm | 4.01e-07 | 72 |
epithelial vesicle | 4.26e-07 | 78 |
vessel | 6.51e-07 | 68 |
vasculature | 8.88e-07 | 78 |
vascular system | 8.88e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.11e-10 | 235 |
disease of cellular proliferation | 1.16e-09 | 239 |