FFCP PHASE1:Hg19::chr17:3627185..3627224,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83903 | |EntrezGene=83903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19682 | |HGNC=19682 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF76,A0PJ70 | |UniProt=Q8TF76,A0PJ70 | ||
|association_with_transcript=0bp_to_ENST00000325418,NM_031965,uc002fwp.2_5end | |association_with_transcript=0bp_to_ENST00000325418,NM_031965,uc002fwp.2_5end | ||
|cluster_id=chr17:3627185..3627224,+ | |||
|coexpression_cluster_id=C281 | |coexpression_cluster_id=C281 | ||
|description=CAGE_peak_1_at_GSG2_5end | |description=CAGE_peak_1_at_GSG2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!4.06e-21!254;CL:0000012!6.68e-19!682;CL:0000548!7.95e-19!679;CL:0000004!7.95e-19!679;CL:0000255!7.95e-19!679;CL:0002321!4.48e-12!248;CL:0000220!2.08e-11!246;CL:0000003!3.98e-11!722;CL:0000063!2.32e-08!578;CL:0000333!3.39e-08!41;CL:0000133!1.02e-07!59;CL:0000144!1.35e-07!625;CL:0000055!4.14e-07!180;CL:0000076!7.71e-07!62 | |ontology_enrichment_celltype=CL:0000066!4.06e-21!254;CL:0000012!6.68e-19!682;CL:0000548!7.95e-19!679;CL:0000004!7.95e-19!679;CL:0000255!7.95e-19!679;CL:0002321!4.48e-12!248;CL:0000220!2.08e-11!246;CL:0000003!3.98e-11!722;CL:0000063!2.32e-08!578;CL:0000333!3.39e-08!41;CL:0000133!1.02e-07!59;CL:0000144!1.35e-07!625;CL:0000055!4.14e-07!180;CL:0000076!7.71e-07!62 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.74e-21,253;CL:0002321,1.15e-11,250;CL:0000333,1.77e-08,41;CL:0000133,7.58e-08,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.46e-38!235;DOID:14566!4.51e-37!239;DOID:0050687!3.52e-19!143;DOID:0050686!2.26e-18!137;DOID:2531!1.86e-17!51;DOID:0060083!1.86e-17!51;DOID:305!8.01e-15!106;DOID:1240!4.51e-14!39;DOID:8692!1.18e-10!31 | |ontology_enrichment_disease=DOID:162!2.46e-38!235;DOID:14566!4.51e-37!239;DOID:0050687!3.52e-19!143;DOID:0050686!2.26e-18!137;DOID:2531!1.86e-17!51;DOID:0060083!1.86e-17!51;DOID:305!8.01e-15!106;DOID:1240!4.51e-14!39;DOID:8692!1.18e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.33e-11;39!DOID:2531;3.51e-11;51!DOID:0060083;3.51e-11;51!DOID:8692;1.10e-10;31 | |ontology_enrichment_disease_v019=DOID:1240;2.33e-11;39!DOID:2531;3.51e-11;51!DOID:0060083;3.51e-11;51!DOID:8692;1.10e-10;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.89e-38,235;DOID:14566,8.60e-37,239;DOID:0050687,4.10e-19,143;DOID:0050686,2.60e-18,137;DOID:2531,7.38e-18,51;DOID:0060083,7.38e-18,51;DOID:305,1.15e-14,106;DOID:1240,2.18e-14,39;DOID:8692,6.98e-11,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@GSG2 | |short_description=p1@GSG2 | ||
}} | }} |
Latest revision as of 18:36, 19 September 2015
Short description: | p1@GSG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GSG2_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000325418, NM_031965, uc002fwp.2_5end |
EntrezGene: | GSG2 |
HGNC: | 19682 |
UniProt: | Q8TF76A0PJ70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.74e-21 | 253 |
embryonic cell | 1.15e-11 | 250 |
migratory neural crest cell | 1.77e-08 | 41 |
neurectodermal cell | 7.58e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.89e-38 | 235 |
disease of cellular proliferation | 8.60e-37 | 239 |
cell type cancer | 4.10e-19 | 143 |
organ system cancer | 2.60e-18 | 137 |
hematologic cancer | 7.38e-18 | 51 |
immune system cancer | 7.38e-18 | 51 |
carcinoma | 1.15e-14 | 106 |
leukemia | 2.18e-14 | 39 |
myeloid leukemia | 6.98e-11 | 31 |