FFCP PHASE1:Hg19::chr22:31487308..31487328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |EntrezGene=6525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11126 | |HGNC=11126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=361bp_to_uc011alg.1_5end | |association_with_transcript=361bp_to_uc011alg.1_5end | ||
|cluster_id=chr22:31487308..31487328,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_2_at_SMTN_5end | |description=CAGE_peak_2_at_SMTN_5end | ||
|id=chr22:31487308..31487328,+ | |id=chr22:31487308..31487328,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;3.43e-11;65!UBERON:0007297;2.22e-10;2!UBERON:0006965;1.27e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-28!115 | |ontology_enrichment_uberon=UBERON:0007023!1.13e-28!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.46e-15;17!UBERON:0005409;5.42e-15;22!UBERON:0006947;7.53e-15;3!UBERON:0004054;7.53e-15;3!UBERON:0004921;2.93e-11;33!UBERON:0005904;2.97e-11;4!UBERON:0000059;1.07e-10;11!UBERON:0003135;2.26e-10;11!UBERON:0003127;1.25e-09;2!UBERON:0002081;2.41e-09;2!UBERON:0002108;6.62e-09;4!UBERON:0001155;9.40e-09;9!UBERON:0004175;1.59e-07;21!UBERON:0007023;1.84e-07;114!UBERON:0003101;4.50e-07;22!UBERON:0000079;4.50e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.60e-27,114;UBERON:0000160,1.46e-15,17;UBERON:0006947,7.53e-15,3;UBERON:0004054,7.53e-15,3;UBERON:0005409,4.52e-13,25;UBERON:0005904,2.97e-11,4;UBERON:0000059,1.08e-10,11;UBERON:0003135,2.26e-10,11;UBERON:0003127,1.36e-09,2;UBERON:0002081,2.21e-09,2;UBERON:0010227,2.21e-09,2;UBERON:0002108,6.53e-09,4;UBERON:0001155,9.40e-09,9;UBERON:0004921,2.57e-07,118;UBERON:0003101,4.50e-07,22;UBERON:0000079,4.50e-07,22 | |||
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| ||
|short_description=p2@SMTN | |short_description=p2@SMTN | ||
}} | }} |
Latest revision as of 19:19, 19 September 2015
Short description: | p2@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMTN_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 361bp_to_uc011alg.1_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.60e-27 | 114 |
intestine | 1.46e-15 | 17 |
male genital duct | 7.53e-15 | 3 |
internal male genitalia | 7.53e-15 | 3 |
gastrointestinal system | 4.52e-13 | 25 |
duct of male reproductive system | 2.97e-11 | 4 |
large intestine | 1.08e-10 | 11 |
male reproductive organ | 2.26e-10 | 11 |
open tracheal system trachea | 1.36e-09 | 2 |
cardiac atrium | 2.21e-09 | 2 |
future cardiac atrium | 2.21e-09 | 2 |
small intestine | 6.53e-09 | 4 |
colon | 9.40e-09 | 9 |
subdivision of digestive tract | 2.57e-07 | 118 |
male organism | 4.50e-07 | 22 |
male reproductive system | 4.50e-07 | 22 |