FFCP PHASE1:Hg19::chr22:31489346..31489371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |EntrezGene=6525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11126 | |HGNC=11126 | ||
|TSSclassifier=strong | |||
|UniProt=B5MBZ4 | |UniProt=B5MBZ4 | ||
|association_with_transcript=0bp_to_ENST00000403419,ENST00000493335,uc011alh.1_5end | |association_with_transcript=0bp_to_ENST00000403419,ENST00000493335,uc011alh.1_5end | ||
|cluster_id=chr22:31489346..31489371,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_SMTN_5end | |description=CAGE_peak_3_at_SMTN_5end | ||
|id=chr22:31489346..31489371,+ | |id=chr22:31489346..31489371,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.20e-08!9 | |ontology_enrichment_celltype=CL:0000188!1.20e-08!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.50e-12;65!UBERON:0005062;1.79e-09;4!UBERON:0007284;1.79e-09;4!UBERON:0006965;5.02e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;5.57e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.58e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003978;1.69e-12;3!UBERON:0000946;1.69e-12;3!UBERON:0004151;1.72e-12;3!UBERON:0007100;3.02e-11;25!UBERON:0007023;1.03e-09;114!UBERON:0002081;8.99e-09;2!UBERON:0005090;9.51e-09;2!UBERON:0001630;9.51e-09;2!UBERON:0002133;9.88e-09;2!UBERON:0000341;1.55e-08;2!UBERON:0003127;5.49e-08;2!UBERON:0001134;5.61e-08;16!UBERON:0002036;5.61e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.89e-42,114;UBERON:0003978,1.62e-12,3;UBERON:0009751,1.62e-12,3;UBERON:0004151,1.62e-12,3;UBERON:0000946,1.62e-12,3;UBERON:0002523,1.62e-12,3;UBERON:0005983,1.62e-12,3;UBERON:0002165,1.62e-12,3;UBERON:0002062,1.62e-12,3;UBERON:0007280,1.62e-12,3;UBERON:0007100,2.75e-10,27;UBERON:0003103,3.30e-09,68;UBERON:0002081,8.49e-09,2;UBERON:0010227,8.49e-09,2;UBERON:0002133,9.52e-09,2;UBERON:0005090,9.89e-09,2;UBERON:0001630,9.89e-09,2;UBERON:0000341,1.61e-08,2;UBERON:0003127,6.93e-08,2 | |||
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|short_description=p3@SMTN | |short_description=p3@SMTN | ||
}} | }} |
Latest revision as of 19:25, 19 September 2015
Short description: | p3@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMTN_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000403419, ENST00000493335, uc011alh.1_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | B5MBZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.89e-42 | 114 |
valve | 1.62e-12 | 3 |
cardiac mesenchyme | 1.62e-12 | 3 |
cardiac chamber | 1.62e-12 | 3 |
cardial valve | 1.62e-12 | 3 |
tunica intima | 1.62e-12 | 3 |
heart layer | 1.62e-12 | 3 |
endocardium | 1.62e-12 | 3 |
endocardial cushion | 1.62e-12 | 3 |
presumptive endocardium | 1.62e-12 | 3 |
primary circulatory organ | 2.75e-10 | 27 |
compound organ | 3.30e-09 | 68 |
cardiac atrium | 8.49e-09 | 2 |
future cardiac atrium | 8.49e-09 | 2 |
atrioventricular valve | 9.52e-09 | 2 |
muscle structure | 9.89e-09 | 2 |
muscle organ | 9.89e-09 | 2 |
throat | 1.61e-08 | 2 |
open tracheal system trachea | 6.93e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.58e-09 | 2 |