FFCP PHASE1:Hg19::chr1:92351643..92351652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7049 | |EntrezGene=7049 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11774 | |HGNC=11774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000465892_5end | |association_with_transcript=13bp_to_ENST00000465892_5end | ||
|cluster_id=chr1:92351643..92351652,- | |||
|coexpression_cluster_id=C4007 | |coexpression_cluster_id=C4007 | ||
|description=CAGE_peak_6_at_TGFBR3_5end | |description=CAGE_peak_6_at_TGFBR3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.24e-07;7!UBERON:0006603;6.96e-07;65 | |ontology_enrichment_development_v019=UBERON:0004872;3.24e-07;7!UBERON:0006603;6.96e-07;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-30!115 | |ontology_enrichment_uberon=UBERON:0007023!2.33e-30!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;2.17e-08;6!UBERON:0003293;2.17e-08;6!UBERON:0003294;2.17e-08;6!UBERON:0010047;2.17e-08;6!UBERON:0003408;2.17e-08;6!UBERON:0000167;2.17e-08;6!UBERON:0000922;3.55e-08;49!UBERON:0004921;1.49e-07;33!UBERON:0006947;2.81e-07;3!UBERON:0004054;2.81e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001044;2.17e-08;6!UBERON:0003293;2.17e-08;6!UBERON:0003294;2.17e-08;6!UBERON:0010047;2.17e-08;6!UBERON:0003408;2.17e-08;6!UBERON:0000167;2.17e-08;6!UBERON:0000922;3.55e-08;49!UBERON:0004921;1.49e-07;33!UBERON:0006947;2.81e-07;3!UBERON:0004054;2.81e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.90e-22,114;UBERON:0001044,1.27e-08,6;UBERON:0003293,1.27e-08,6;UBERON:0003294,1.27e-08,6;UBERON:0010047,1.27e-08,6;UBERON:0000167,1.27e-08,6;UBERON:0004921,3.61e-08,118;UBERON:0006947,3.74e-07,3;UBERON:0004054,3.74e-07,3;UBERON:0001007,5.00e-07,145;UBERON:0001555,5.00e-07,145;UBERON:0007026,5.00e-07,145 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,1.34088328328186,0,0,0,4.17897005119742,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0.393010762749165,0.616804496998528,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,1.30216690771284,0,0,0.383959833463255,0,0,0,0.80642697289893,1.06976078313403,0.724122019413995,0,0.670700859703636,0,0,0.50133791063589,0.434539556882471,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0.735326160691737,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,1.24484414159907,0.269421344139376,0,0.302714855289863,0.576175924479999,0.468642863667593,0.624320153660641,0,0.298897361103602,0,0,0,0.61246251376468,0,1.23990937410919,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0.612975591598039,0.901428353439581,0,0.179389635688862,1.06778694409284,0.847727604638247,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.252433774244115,0.736399189138395,0.161646056818812,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,1.4763109092493,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0.714889968290738,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.591092280605782,0.862510299438069,1.41177339907723,0,0,0.773288812777695,0,0,0,0,0,0.49076596687656,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,2.0694614258501,0.664225598535437,0,1.39013783148933,0.195801157462741,0,0.206768026122887,0,0.533637789017222,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.657017248110473,0,0.581051892299796,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0,0,0.386682873168488,0.308097234229289,0.15350367472613,0,0.322260734604821,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0.438450885253763,0,1.9676842561399,0,0,0,0,0.0982490410131212,0,0,1.68886108238131,4.61012850143863,0.379473173765715,0.699869440489966,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0.427296284509893,3.84991942105343,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0.422008249231538,0.222617410045812,0,0,1.19548792950642,1.38141957765574,0,0,0.123084805461069,0.622079175323615,0,0,0,4.53759665929895,2.3948309234694,1.11136990144637,0,0.463840490809256,0,0,0,1.44999915086959,0,0,0.709163045303809,0,0.291604613383254,0.520874984799877,0,0.723578631752448,0,0,0,0.438770794307945,0.10893846351899,0,4.61701551022782,0,0,0,0.977826347298073,0.638002319463839,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,1.32686346755009,3.05515072466813,0.593042257361244,0.123563938946503,0,0.471807930864739,1.60515529459758,0.234264445725339,0,0,0.485560759068186,2.36750641709634,1.20990716048664,0,4.48624715362264,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.22308667769421,0.343972064943233,0,0.146178634172371,0.246346371159628,2.81268147816416,0,2.48578814858586,0.137041924646751,0,0.189932387867636,0.391102765469606,0,2.56143593687223,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,3.35138881526705,0.916641696046735,0.717873024576814,0.798716001995964,0,1.11585728720936,1.5452198671947,0,0,0.315132729228895,0.412079291905832,0.808842526250219,0,0,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.630445658393585,2.6751839948849,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.439656701034247,1.32506888912221,0.387848869084652,0.52893040697076,0,0,1.9221734262185,4.55892484789031,1.24271716604159,1.48849806543585,0,0,0,7.07223144380316,6.2672473505675,3.982492497925,3.27872630709804,0,0,0.244052529803926,0.250381861413,0,0.554645257684261,0.683060432355218,0.830091809617385,0,0,0.285465333544967,0,0,0,0.74627401443437,0.23371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| ||
|short_description=p6@TGFBR3 | |short_description=p6@TGFBR3 | ||
}} | }} |
Latest revision as of 19:43, 19 September 2015
Short description: | p6@TGFBR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TGFBR3_5end |
Coexpression cluster: | C4007_Wilms_breast_ovary_mature_vagina_seminal_salivary |
Association with transcript: | 13bp_to_ENST00000465892_5end |
EntrezGene: | TGFBR3 |
HGNC: | 11774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.90e-22 | 114 |
saliva-secreting gland | 1.27e-08 | 6 |
gland of oral region | 1.27e-08 | 6 |
gland of foregut | 1.27e-08 | 6 |
oral gland | 1.27e-08 | 6 |
oral cavity | 1.27e-08 | 6 |
subdivision of digestive tract | 3.61e-08 | 118 |
male genital duct | 3.74e-07 | 3 |
internal male genitalia | 3.74e-07 | 3 |
digestive system | 5.00e-07 | 145 |
digestive tract | 5.00e-07 | 145 |
primitive gut | 5.00e-07 | 145 |