FFCP PHASE1:Hg19::chr10:90343062..90343088,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90343062..90343088,- to FFCP PHASE1:Hg19::chr10:90343062..90343088,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55328 | |EntrezGene=55328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25641 | |HGNC=25641 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VYX0 | |UniProt=Q5VYX0 | ||
|association_with_transcript=0bp_to_ENST00000466945,ENST00000481793,NM_001031709,NM_018363,uc001kfd.2,uc001kfe.2,uc010qms.1_5end | |||
|cluster_id=chr10:90343062..90343088,- | |||
|description=CAGE_peak_1_at_RNLS_5end | |||
|id=chr10:90343062..90343088,- | |||
|ontology_enrichment_celltype=CL:0000136!1.81e-07!15 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.27e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.78e-09!365;UBERON:0007023!8.26e-08!115;UBERON:0003102!2.72e-07!95;UBERON:0000481!8.05e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.57e-08,99;UBERON:0007023,1.89e-07,114 | |||
|phase1_expression=5.26867299884614,4.49611100171065,5.63817616383885,4.00293193412522,4.02264984984559,4.36169262050184,2.53299878168311,1.89515962028049,3.3954131665979,0.491467873003018,0.697801167972428,1.09220686065086,1.84636884759917,3.09415882400117,1.65698687863958,0.672325146451775,1.20538905604795,4.38186054232424,0.975865597581014,1.60057375499824,1.22400414746552,0.313454721478088,2.57612388417951,1.36874425072884,0.87879847716362,2.21598876669059,1.72411237844886,2.12519109546934,0.393364276848904,2.30297638858328,1.85779347979291,0.919421224478927,2.10844143144775,2.9580320813343,0,0,1.17440175733939,0.553995408531877,1.40381113229099,0.651032612147555,6.04571780447796,4.21061765824673,5.92423805558629,0.145398238779565,0,1.21292030593908,0,1.23350366406548,0.309706370895104,0.28769239232215,0.768482119587302,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0.376484679085209,0.272906150057846,0.449446968890169,1.53041946185451,0,0.639337125799041,0.989553900560148,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.434377689410233,1.81619850790011,0,0.316462387440884,2.74631872205524,2.12604299965044,4.19317291016752,2.58355851636939,1.95229960693958,1.76798145366788,2.28010194992999,2.18808344918999,3.10529061399878,1.75996244461323,1.63841583378639,4.44754626931777,4.69403244823158,2.80277190925209,3.4485146397269,1.32208974556972,0.954053754535364,3.98449078376614,2.34894875748376,1.91136614062614,3.96513985737078,0.560508562981536,2.37045676297569,2.16380747125216,1.96505381374582,1.02800749499755,0.668745981562712,4.56291173287027,3.31413464014313,0,0.779873198196215,2.3568472597987,1.32920336750173,1.08321545506006,0.384273959177026,0.780356085359269,0.657751618414705,0,0,2.52087157375503,2.40786745280742,1.04535523804977,0.113309342697566,1.91610246800961,1.71813722741315,2.78321661221453,3.18565414324097,2.60433381542567,2.85135613334512,3.312652619711,2.8157054453972,1.24930726552346,2.60454977248419,0.821127996921047,1.61285394579786,1.60464117470104,2.02754165435919,7.31420598941885,0.670700859703636,3.19656404608826,6.50590474292219,1.50401373190767,2.75208386025565,0.795285947051099,2.91980922181582,3.59232305223458,2.88248216701333,2.3715392137144,3.07800827419625,1.45718115317017,2.96627554227544,2.27183175558278,1.21890816109487,0.930705723632056,1.43094374583205,2.28797964312051,2.22874500797739,0.79504962946682,0,0.694281003215189,0.56530794192401,0,0.550236083880135,0.417989933073621,1.55050055501597,1.06729878806013,1.00416183829401,0.402829317109147,0.760272105718513,0,0.367663080345869,0.81014194788176,1.96459402224975,1.12264686313085,0.900891843866578,0,0,0.183201743930407,0,0,1.74437620857014,3.47880366186723,2.27934920996244,3.97227542439656,1.14734648299525,3.19201543978521,4.48542080113846,1.06748995729705,1.72667283892012,3.42332138939743,1.88594940897563,1.30769522490767,1.36221684880438,1.72852777344,1.87457145467037,2.80944069147288,1.1409436430889,4.63290909710583,2.11382097558777,1.29498355494505,2.24721290723598,3.26646674007829,2.7023549808589,3.61640234115179,5.94001428641027,4.20353779773547,0,1.43723628363248,2.86171393721913,2.75260743718321,2.49357703935765,1.75591048352335,3.67785354958824,4.35690370829131,0.567160915800105,1.97328599257748,2.77624605464138,2.7551147150743,2.10063767259082,4.43125875725287,2.83404594050192,3.7223371266318,2.53164498361899,2.72823614451356,2.52433774244115,2.57739716198438,5.4959659318396,2.84007674013291,3.22406714328449,2.03472710772585,2.89891279744945,3.00020732649918,3.44165514466805,3.17131635936948,2.78312513475119,2.5562667431294,2.17688215532278,1.7662459561294,0.72995471815166,4.69348596989448,2.57296375277154,2.76269842704961,5.10804720835177,6.49691533502627,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,1.26755034821831,2.94848165003288,4.13552934676983,0,2.45976877086227,3.08822058537346,2.08525542276389,2.24803506515239,0.904760751704678,4.35165692245089,2.28065813717227,1.03993478527958,0,1.73895607462615,1.87853910777315,0,0,0.380508304469197,2.37061319387782,2.57545848628462,4.18568910348575,4.44608103764552,3.41851673264075,5.62403003920662,3.02367830757947,1.84307626415102,0.626909658919938,1.45316969256981,1.91691339582606,0.492663237895943,0.176096868026452,1.86595303986695,1.58531948758658,1.76739406796932,0.952468414382536,0.763976851116555,1.17217447210047,1.71072446022705,1.95372236136315,0.901029173531752,3.71574362419752,0.784917590417525,0.43596006883328,0.66004457238855,2.71470603091333,0,3.381211010224,3.98907174877306,3.12022310734098,1.80045161983499,1.41849132023278,0.799266537048298,2.85955987316295,1.08524321078289,0.823240336780769,2.28015329005615,3.909311436168,3.16780749173372,4.52159065589379,2.61460037580088,2.69927076191554,1.2162378064119,3.51579964002488,4.21667878966063,1.91699884393266,1.14861935834114,2.85273810081437,3.04040744001916,2.67119219315498,2.86497541183833,5.15591662370225,2.561399882625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| ||
|short_description=p1@RNLS | |||
}} | }} |
Latest revision as of 19:44, 19 September 2015
Short description: | p1@RNLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNLS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000466945, ENST00000481793, NM_001031709, NM_018363, uc001kfd.2, uc001kfe.2, uc010qms.1_5end |
EntrezGene: | RNLS |
HGNC: | 25641 |
UniProt: | Q5VYX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.27e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.57e-08 | 99 |
adult organism | 1.89e-07 | 114 |