FFCP PHASE1:Hg19::chr7:84122166..84122191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |EntrezGene=10371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |HGNC=10723 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD25 | |UniProt=C9JD25 | ||
|association_with_transcript=-126bp_to_ENST00000424555_5end | |association_with_transcript=-126bp_to_ENST00000424555_5end | ||
|cluster_id=chr7:84122166..84122191,- | |||
|description=CAGE_peak_14_at_SEMA3A_5end | |description=CAGE_peak_14_at_SEMA3A_5end | ||
|id=chr7:84122166..84122191,- | |id=chr7:84122166..84122191,- | ||
|ontology_enrichment_celltype=CL:0002620!9.19e-21!23;CL:0000057!2.10e-12!75 | |ontology_enrichment_celltype=CL:0002620!9.19e-21!23;CL:0000057!2.10e-12!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.64e-31;23!CL:0000153;5.31e-13;9!CL:0000447;5.31e-13;9!CL:0000138;7.89e-13;6!CL:0000327;1.11e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.25e-31,23;CL:0000153,4.57e-13,9;CL:0000447,4.57e-13,9;CL:0000058,7.54e-13,6;CL:0000138,7.54e-13,6;CL:0000057,2.62e-10,76;CL:0000327,1.02e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!4.73e-10!5;DOID:450!4.73e-10!5;DOID:66!4.73e-10!5;DOID:423!4.73e-10!5;DOID:0080000!4.73e-10!5;DOID:11722!4.73e-10!5 | |ontology_enrichment_disease=DOID:17!4.73e-10!5;DOID:450!4.73e-10!5;DOID:66!4.73e-10!5;DOID:423!4.73e-10!5;DOID:0080000!4.73e-10!5;DOID:11722!4.73e-10!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.07e-14;5!DOID:450;1.07e-14;5!DOID:66;1.07e-14;5!DOID:423;1.07e-14;5!DOID:0080000;1.07e-14;5!DOID:11722;1.07e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.20e-15,5;DOID:450,6.20e-15,5;DOID:66,6.20e-15,5;DOID:423,6.20e-15,5;DOID:0080000,6.20e-15,5;DOID:11722,6.20e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.60e-16!40;UBERON:0002199!1.68e-13!45;UBERON:0002416!1.68e-13!45;UBERON:0003102!7.28e-10!95;UBERON:0000475!5.17e-07!365 | |ontology_enrichment_uberon=UBERON:0002097!5.60e-16!40;UBERON:0002199!1.68e-13!45;UBERON:0002416!1.68e-13!45;UBERON:0003102!7.28e-10!95;UBERON:0000475!5.17e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.52e-19;41!UBERON:0002199;1.80e-14;46!UBERON:0002416;1.80e-14;46!UBERON:0003102;2.76e-11;50!UBERON:0000007;3.94e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.70e-25,41;UBERON:0002199,5.05e-22,46;UBERON:0002416,5.05e-22,46;UBERON:0000007,4.04e-10,2;UBERON:0003102,1.37e-09,99 | |||
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| ||
|short_description=p14@SEMA3A | |short_description=p14@SEMA3A | ||
}} | }} |
Latest revision as of 19:52, 19 September 2015
Short description: | p14@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SEMA3A_5end |
Coexpression cluster: | NA |
Association with transcript: | -126bp_to_ENST00000424555_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | C9JD25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.25e-31 | 23 |
GAG secreting cell | 4.57e-13 | 9 |
carbohydrate secreting cell | 4.57e-13 | 9 |
chondroblast | 7.54e-13 | 6 |
chondrocyte | 7.54e-13 | 6 |
fibroblast | 2.62e-10 | 76 |
extracellular matrix secreting cell | 1.02e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.70e-25 | 41 |
integument | 5.05e-22 | 46 |
integumental system | 5.05e-22 | 46 |
pituitary gland | 4.04e-10 | 2 |
surface structure | 1.37e-09 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.20e-15 | 5 |
myotonic disease | 6.20e-15 | 5 |
muscle tissue disease | 6.20e-15 | 5 |
myopathy | 6.20e-15 | 5 |
muscular disease | 6.20e-15 | 5 |
myotonic dystrophy | 6.20e-15 | 5 |