FFCP PHASE1:Hg19::chr3:93783330..93783364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63899 | |EntrezGene=63899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=26208 | |HGNC=26208 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_HQ447621_5end | |association_with_transcript=51bp_to_HQ447621_5end | ||
|cluster_id=chr3:93783330..93783364,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_3_at_NSUN3_5end | |description=CAGE_peak_3_at_NSUN3_5end | ||
|id=chr3:93783330..93783364,+ | |id=chr3:93783330..93783364,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.38e-35!42;CL:0000860!3.68e-32!45;CL:0002194!3.14e-23!63;CL:0000576!3.14e-23!63;CL:0000040!3.14e-23!63;CL:0000559!3.14e-23!63;CL:0000839!8.65e-23!70;CL:0002009!3.84e-22!65;CL:0000766!7.23e-21!76;CL:0000557!2.93e-19!71;CL:0000763!2.50e-14!112;CL:0000049!2.50e-14!112;CL:0002087!5.95e-14!119;CL:0000738!2.11e-13!140;CL:0002031!1.62e-12!124;CL:0000037!9.00e-11!172;CL:0000566!9.00e-11!172;CL:0000988!6.23e-10!182;CL:0002032!1.77e-09!165;CL:0000837!1.77e-09!165 | |ontology_enrichment_celltype=CL:0002057!2.38e-35!42;CL:0000860!3.68e-32!45;CL:0002194!3.14e-23!63;CL:0000576!3.14e-23!63;CL:0000040!3.14e-23!63;CL:0000559!3.14e-23!63;CL:0000839!8.65e-23!70;CL:0002009!3.84e-22!65;CL:0000766!7.23e-21!76;CL:0000557!2.93e-19!71;CL:0000763!2.50e-14!112;CL:0000049!2.50e-14!112;CL:0002087!5.95e-14!119;CL:0000738!2.11e-13!140;CL:0002031!1.62e-12!124;CL:0000037!9.00e-11!172;CL:0000566!9.00e-11!172;CL:0000988!6.23e-10!182;CL:0002032!1.77e-09!165;CL:0000837!1.77e-09!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-74;33!CL:0002057;1.40e-74;33!CL:0000473;6.87e-50;39!CL:0000234;6.87e-50;39!CL:0000576;4.78e-35;48!CL:0000766;2.18e-18;69!CL:0000763;9.47e-10;100!CL:0000764;1.01e-09;2!CL:0000558;1.01e-09;2!CL:0002087;1.63e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.11e-63,42;CL:0002057,2.11e-63,42;CL:0000473,1.20e-54,48;CL:0000234,1.20e-54,48;CL:0000839,7.27e-44,66;CL:0002194,2.19e-42,59;CL:0000576,2.19e-42,59;CL:0000040,2.19e-42,59;CL:0000559,2.19e-42,59;CL:0002009,8.35e-41,61;CL:0000557,1.28e-36,67;CL:0000766,1.84e-36,72;CL:0000763,3.17e-26,108;CL:0000049,3.17e-26,108;CL:0002031,3.73e-21,120;CL:0002087,9.37e-19,115;CL:0000738,2.79e-16,136;CL:0002032,2.58e-15,161;CL:0000837,2.58e-15,161;CL:0000037,2.17e-14,168;CL:0000988,2.61e-13,177;CL:0000764,1.01e-09,2;CL:0000765,1.01e-09,2;CL:0000050,1.01e-09,2;CL:0000038,1.01e-09,2;CL:0000558,1.01e-09,2;CL:0000547,1.01e-09,2;CL:0000549,1.01e-09,2;CL:0000550,1.01e-09,2;CL:0000552,1.01e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.24e-48;42!CL:0000049;1.62e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.01e-25!102;UBERON:0003061!5.01e-25!102;UBERON:0002193!2.96e-22!112;UBERON:0002371!8.78e-16!80;UBERON:0001474!6.80e-14!86;UBERON:0000178!1.92e-13!15;UBERON:0000179!1.92e-13!15;UBERON:0000463!1.92e-13!15;UBERON:0004765!9.65e-12!101;UBERON:0001434!9.65e-12!101;UBERON:0003081!6.00e-11!216;UBERON:0002405!8.40e-11!115 | |ontology_enrichment_uberon=UBERON:0002390!5.01e-25!102;UBERON:0003061!5.01e-25!102;UBERON:0002193!2.96e-22!112;UBERON:0002371!8.78e-16!80;UBERON:0001474!6.80e-14!86;UBERON:0000178!1.92e-13!15;UBERON:0000179!1.92e-13!15;UBERON:0000463!1.92e-13!15;UBERON:0004765!9.65e-12!101;UBERON:0001434!9.65e-12!101;UBERON:0003081!6.00e-11!216;UBERON:0002405!8.40e-11!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.90e-22;15!UBERON:0000179;1.90e-22;15!UBERON:0000463;1.90e-22;15!UBERON:0002390;6.56e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.12e-48,98;UBERON:0003061,1.12e-48,98;UBERON:0002193,1.97e-43,108;UBERON:0002371,1.45e-31,76;UBERON:0001474,8.31e-29,82;UBERON:0002405,1.05e-26,93;UBERON:0004765,1.07e-25,90;UBERON:0001434,1.67e-22,100;UBERON:0000178,1.91e-22,15;UBERON:0000179,1.91e-22,15;UBERON:0000463,1.91e-22,15;UBERON:0003081,5.66e-22,203;UBERON:0000926,8.84e-14,315;UBERON:0004120,8.84e-14,315;UBERON:0006603,8.84e-14,315;UBERON:0002204,4.97e-12,167 | |||
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| ||
|short_description=p3@NSUN3 | |short_description=p3@NSUN3 | ||
}} | }} |
Latest revision as of 20:03, 19 September 2015
Short description: | p3@NSUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NSUN3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 51bp_to_HQ447621_5end |
EntrezGene: | NSUN3 |
HGNC: | 26208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.12e-48 | 98 |
blood island | 1.12e-48 | 98 |
hemolymphoid system | 1.97e-43 | 108 |
bone marrow | 1.45e-31 | 76 |
bone element | 8.31e-29 | 82 |
immune system | 1.05e-26 | 93 |
skeletal element | 1.07e-25 | 90 |
skeletal system | 1.67e-22 | 100 |
blood | 1.91e-22 | 15 |
haemolymphatic fluid | 1.91e-22 | 15 |
organism substance | 1.91e-22 | 15 |
lateral plate mesoderm | 5.66e-22 | 203 |
mesoderm | 8.84e-14 | 315 |
mesoderm-derived structure | 8.84e-14 | 315 |
presumptive mesoderm | 8.84e-14 | 315 |
musculoskeletal system | 4.97e-12 | 167 |