FFCP PHASE1:Hg19::chr19:54377455..54377484,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=459bp_to_AK027693_5end | |association_with_transcript=459bp_to_AK027693_5end | ||
|cluster_id=chr19:54377455..54377484,+ | |||
|coexpression_cluster_id=C482 | |coexpression_cluster_id=C482 | ||
|description=CAGE_peak_5_at_MYADM_5end | |description=CAGE_peak_5_at_MYADM_5end | ||
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|ontology_enrichment_celltype=CL:0000144!1.14e-14!625;CL:0000048!5.58e-14!430;CL:0002057!1.96e-13!42;CL:0002371!3.48e-13!591;CL:0000723!7.00e-13!436;CL:0000034!2.71e-12!444;CL:0000860!6.31e-11!45;CL:0000548!1.04e-10!679;CL:0000004!1.04e-10!679;CL:0000255!1.04e-10!679;CL:0000012!2.70e-10!682;CL:0000134!2.48e-09!358;CL:0002320!3.36e-09!365;CL:0000766!4.44e-09!76;CL:0000055!1.79e-08!180;CL:0000557!3.78e-08!71;CL:0000183!7.11e-08!59;CL:0000839!1.92e-07!70;CL:0000057!2.95e-07!75;CL:0002009!3.07e-07!65;CL:0000222!3.43e-07!119;CL:0000192!3.56e-07!42;CL:0000514!3.56e-07!42;CL:0000063!4.46e-07!578;CL:0002194!6.29e-07!63;CL:0000576!6.29e-07!63;CL:0000040!6.29e-07!63;CL:0000559!6.29e-07!63;CL:0000219!6.86e-07!390;CL:0000003!8.12e-07!722 | |ontology_enrichment_celltype=CL:0000144!1.14e-14!625;CL:0000048!5.58e-14!430;CL:0002057!1.96e-13!42;CL:0002371!3.48e-13!591;CL:0000723!7.00e-13!436;CL:0000034!2.71e-12!444;CL:0000860!6.31e-11!45;CL:0000548!1.04e-10!679;CL:0000004!1.04e-10!679;CL:0000255!1.04e-10!679;CL:0000012!2.70e-10!682;CL:0000134!2.48e-09!358;CL:0002320!3.36e-09!365;CL:0000766!4.44e-09!76;CL:0000055!1.79e-08!180;CL:0000557!3.78e-08!71;CL:0000183!7.11e-08!59;CL:0000839!1.92e-07!70;CL:0000057!2.95e-07!75;CL:0002009!3.07e-07!65;CL:0000222!3.43e-07!119;CL:0000192!3.56e-07!42;CL:0000514!3.56e-07!42;CL:0000063!4.46e-07!578;CL:0002194!6.29e-07!63;CL:0000576!6.29e-07!63;CL:0000040!6.29e-07!63;CL:0000559!6.29e-07!63;CL:0000219!6.86e-07!390;CL:0000003!8.12e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.84e-16;33!CL:0002057;1.84e-16;33!CL:0000473;5.86e-14;39!CL:0000234;5.86e-14;39!CL:0000766;4.79e-07;69!CL:0000576;8.28e-07;48 | |ontology_enrichment_celltype_v019=CL:0000860;1.84e-16;33!CL:0002057;1.84e-16;33!CL:0000473;5.86e-14;39!CL:0000234;5.86e-14;39!CL:0000766;4.79e-07;69!CL:0000576;8.28e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.33e-16,427;CL:0000723,2.85e-15,433;CL:0000034,1.35e-14,441;CL:0000860,2.31e-13,42;CL:0002057,2.31e-13,42;CL:0000473,3.04e-13,48;CL:0000234,3.04e-13,48;CL:0000134,5.45e-12,354;CL:0002320,9.59e-12,361;CL:0000766,1.36e-10,72;CL:0000557,2.66e-09,67;CL:0000219,1.08e-08,386;CL:0000839,1.53e-08,66;CL:0002009,4.70e-08,61;CL:0002194,1.07e-07,59;CL:0000576,1.07e-07,59;CL:0000040,1.07e-07,59;CL:0000559,1.07e-07,59;CL:0000192,2.27e-07,43;CL:0000514,2.27e-07,43;CL:0000222,2.66e-07,121;CL:0000057,5.09e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;9.05e-11;42 | |ontology_enrichment_development_v019=CL:0002057;9.05e-11;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.17e-19!216;UBERON:0000926!8.68e-16!448;UBERON:0004120!8.68e-16!448;UBERON:0006603!8.68e-16!448;UBERON:0002204!3.69e-11!167;UBERON:0003914!1.28e-09!118;UBERON:0005256!3.68e-09!143;UBERON:0002384!8.45e-09!375;UBERON:0001009!2.11e-08!113;UBERON:0004535!2.46e-08!110;UBERON:0001637!1.12e-07!42;UBERON:0003509!1.12e-07!42;UBERON:0004572!1.12e-07!42;UBERON:0002390!2.45e-07!102;UBERON:0003061!2.45e-07!102;UBERON:0002371!3.68e-07!80;UBERON:0001981!7.87e-07!60;UBERON:0007500!7.87e-07!60;UBERON:0004537!7.87e-07!60;UBERON:0006965!7.87e-07!60;UBERON:0002193!8.16e-07!112 | |ontology_enrichment_uberon=UBERON:0003081!2.17e-19!216;UBERON:0000926!8.68e-16!448;UBERON:0004120!8.68e-16!448;UBERON:0006603!8.68e-16!448;UBERON:0002204!3.69e-11!167;UBERON:0003914!1.28e-09!118;UBERON:0005256!3.68e-09!143;UBERON:0002384!8.45e-09!375;UBERON:0001009!2.11e-08!113;UBERON:0004535!2.46e-08!110;UBERON:0001637!1.12e-07!42;UBERON:0003509!1.12e-07!42;UBERON:0004572!1.12e-07!42;UBERON:0002390!2.45e-07!102;UBERON:0003061!2.45e-07!102;UBERON:0002371!3.68e-07!80;UBERON:0001981!7.87e-07!60;UBERON:0007500!7.87e-07!60;UBERON:0004537!7.87e-07!60;UBERON:0006965!7.87e-07!60;UBERON:0002193!8.16e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p5@MYADM | |short_description=p5@MYADM | ||
}} | }} |
Latest revision as of 20:14, 19 September 2015
Short description: | p5@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | 459bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.33e-16 | 427 |
somatic stem cell | 2.85e-15 | 433 |
stem cell | 1.35e-14 | 441 |
classical monocyte | 2.31e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-13 | 42 |
defensive cell | 3.04e-13 | 48 |
phagocyte | 3.04e-13 | 48 |
mesenchymal cell | 5.45e-12 | 354 |
connective tissue cell | 9.59e-12 | 361 |
myeloid leukocyte | 1.36e-10 | 72 |
granulocyte monocyte progenitor cell | 2.66e-09 | 67 |
motile cell | 1.08e-08 | 386 |
myeloid lineage restricted progenitor cell | 1.53e-08 | 66 |
macrophage dendritic cell progenitor | 4.70e-08 | 61 |
monopoietic cell | 1.07e-07 | 59 |
monocyte | 1.07e-07 | 59 |
monoblast | 1.07e-07 | 59 |
promonocyte | 1.07e-07 | 59 |
smooth muscle cell | 2.27e-07 | 43 |
smooth muscle myoblast | 2.27e-07 | 43 |
mesodermal cell | 2.66e-07 | 121 |
fibroblast | 5.09e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.42e-25 | 315 |
mesoderm-derived structure | 8.42e-25 | 315 |
presumptive mesoderm | 8.42e-25 | 315 |
lateral plate mesoderm | 3.80e-20 | 203 |
connective tissue | 1.41e-11 | 371 |
musculoskeletal system | 9.15e-10 | 167 |
epithelial tube | 1.06e-09 | 117 |
hematopoietic system | 2.70e-08 | 98 |
blood island | 2.70e-08 | 98 |
circulatory system | 4.85e-08 | 112 |
trunk mesenchyme | 5.16e-08 | 122 |
cardiovascular system | 5.37e-08 | 109 |
bone marrow | 6.09e-08 | 76 |
artery | 1.37e-07 | 42 |
arterial blood vessel | 1.37e-07 | 42 |
arterial system | 1.37e-07 | 42 |
hemolymphoid system | 2.21e-07 | 108 |
mesenchyme | 2.45e-07 | 160 |
entire embryonic mesenchyme | 2.45e-07 | 160 |
epithelial vesicle | 3.35e-07 | 78 |
epithelial tube open at both ends | 5.66e-07 | 59 |
blood vessel | 5.66e-07 | 59 |
blood vasculature | 5.66e-07 | 59 |
vascular cord | 5.66e-07 | 59 |
bone element | 9.62e-07 | 82 |