FFCP PHASE1:Hg19::chr17:37026303..37026323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3927 | |EntrezGene=3927 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6513 | |HGNC=6513 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIC4 | |UniProt=B4DIC4 | ||
|association_with_transcript=0bp_to_ENST00000443937_5end | |association_with_transcript=0bp_to_ENST00000443937_5end | ||
|cluster_id=chr17:37026303..37026323,+ | |||
|description=CAGE_peak_1_at_LASP1_5end | |description=CAGE_peak_1_at_LASP1_5end | ||
|id=chr17:37026303..37026323,+ | |id=chr17:37026303..37026323,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.60e-24!679;CL:0000004!2.60e-24!679;CL:0000255!2.60e-24!679;CL:0000222!2.32e-23!119;CL:0000012!6.06e-23!682;CL:0000144!1.02e-20!625;CL:0002371!2.70e-19!591;CL:0000003!1.37e-16!722;CL:0000055!1.92e-16!180;CL:0000183!1.23e-12!59;CL:0000057!1.26e-12!75;CL:0000192!2.86e-12!42;CL:0000514!2.86e-12!42;CL:0000680!5.14e-12!57;CL:0000056!5.14e-12!57;CL:0000355!5.14e-12!57;CL:0000220!3.24e-11!246;CL:0000187!6.43e-11!54;CL:0002321!9.79e-11!248;CL:0000063!3.05e-10!578;CL:0000213!3.74e-10!57;CL:0000215!3.74e-10!57;CL:0000359!4.15e-10!32;CL:0000048!2.74e-09!430;CL:0000723!1.19e-08!436;CL:0000393!5.81e-08!60;CL:0000211!5.81e-08!60;CL:0002078!1.58e-07!44;CL:0000034!3.32e-07!444;CL:0000115!7.55e-07!35 | |ontology_enrichment_celltype=CL:0000548!2.60e-24!679;CL:0000004!2.60e-24!679;CL:0000255!2.60e-24!679;CL:0000222!2.32e-23!119;CL:0000012!6.06e-23!682;CL:0000144!1.02e-20!625;CL:0002371!2.70e-19!591;CL:0000003!1.37e-16!722;CL:0000055!1.92e-16!180;CL:0000183!1.23e-12!59;CL:0000057!1.26e-12!75;CL:0000192!2.86e-12!42;CL:0000514!2.86e-12!42;CL:0000680!5.14e-12!57;CL:0000056!5.14e-12!57;CL:0000355!5.14e-12!57;CL:0000220!3.24e-11!246;CL:0000187!6.43e-11!54;CL:0002321!9.79e-11!248;CL:0000063!3.05e-10!578;CL:0000213!3.74e-10!57;CL:0000215!3.74e-10!57;CL:0000359!4.15e-10!32;CL:0000048!2.74e-09!430;CL:0000723!1.19e-08!436;CL:0000393!5.81e-08!60;CL:0000211!5.81e-08!60;CL:0002078!1.58e-07!44;CL:0000034!3.32e-07!444;CL:0000115!7.55e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.69e-09;32!CL:0000192;4.92e-09;43 | |ontology_enrichment_celltype_v019=CL:0000359;1.69e-09;32!CL:0000192;4.92e-09;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.65e-24,121;CL:0000057,3.99e-13,76;CL:0000192,2.81e-12,43;CL:0000514,2.81e-12,43;CL:0000680,4.67e-12,58;CL:0000056,4.67e-12,58;CL:0000355,4.67e-12,58;CL:0002321,4.95e-11,250;CL:0000187,5.80e-11,55;CL:0000213,1.99e-10,58;CL:0000215,1.99e-10,58;CL:0000359,4.15e-10,32;CL:0000048,1.21e-09,427;CL:0000723,5.45e-09,433;CL:0000393,5.02e-08,61;CL:0000211,5.02e-08,61;CL:0002078,8.59e-08,45;CL:0000034,1.65e-07,441;CL:0000115,4.06e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;4.92e-09;43!CL:0000222;7.94e-07;121 | |ontology_enrichment_development_v019=CL:0000514;4.92e-09;43!CL:0000222;7.94e-07;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!9.99e-17!143;UBERON:0002100!1.90e-14!216;UBERON:0002049!3.83e-14!79;UBERON:0007798!3.83e-14!79;UBERON:0003914!7.09e-14!118;UBERON:0000914!9.64e-13!83;UBERON:0002329!9.64e-13!83;UBERON:0003077!9.64e-13!83;UBERON:0003059!9.64e-13!83;UBERON:0007282!9.64e-13!83;UBERON:0009618!9.64e-13!83;UBERON:0007285!9.64e-13!83;UBERON:0000055!4.83e-12!69;UBERON:0000490!5.01e-12!138;UBERON:0000926!5.32e-12!448;UBERON:0004120!5.32e-12!448;UBERON:0006603!5.32e-12!448;UBERON:0004290!2.02e-11!70;UBERON:0004535!3.35e-11!110;UBERON:0000486!5.98e-11!82;UBERON:0001981!9.08e-11!60;UBERON:0007500!9.08e-11!60;UBERON:0004537!9.08e-11!60;UBERON:0006965!9.08e-11!60;UBERON:0001637!1.16e-10!42;UBERON:0003509!1.16e-10!42;UBERON:0004572!1.16e-10!42;UBERON:0001134!1.72e-10!61;UBERON:0002036!1.72e-10!61;UBERON:0003082!1.72e-10!61;UBERON:0002385!3.01e-10!63;UBERON:0001015!3.01e-10!63;UBERON:0000383!3.01e-10!63;UBERON:0001009!5.98e-10!113;UBERON:0004872!2.13e-09!84;UBERON:0003081!5.76e-09!216;UBERON:0003104!2.49e-08!238;UBERON:0009142!2.49e-08!238;UBERON:0004573!6.06e-08!33;UBERON:0004571!6.06e-08!33 | |ontology_enrichment_uberon=UBERON:0005256!9.99e-17!143;UBERON:0002100!1.90e-14!216;UBERON:0002049!3.83e-14!79;UBERON:0007798!3.83e-14!79;UBERON:0003914!7.09e-14!118;UBERON:0000914!9.64e-13!83;UBERON:0002329!9.64e-13!83;UBERON:0003077!9.64e-13!83;UBERON:0003059!9.64e-13!83;UBERON:0007282!9.64e-13!83;UBERON:0009618!9.64e-13!83;UBERON:0007285!9.64e-13!83;UBERON:0000055!4.83e-12!69;UBERON:0000490!5.01e-12!138;UBERON:0000926!5.32e-12!448;UBERON:0004120!5.32e-12!448;UBERON:0006603!5.32e-12!448;UBERON:0004290!2.02e-11!70;UBERON:0004535!3.35e-11!110;UBERON:0000486!5.98e-11!82;UBERON:0001981!9.08e-11!60;UBERON:0007500!9.08e-11!60;UBERON:0004537!9.08e-11!60;UBERON:0006965!9.08e-11!60;UBERON:0001637!1.16e-10!42;UBERON:0003509!1.16e-10!42;UBERON:0004572!1.16e-10!42;UBERON:0001134!1.72e-10!61;UBERON:0002036!1.72e-10!61;UBERON:0003082!1.72e-10!61;UBERON:0002385!3.01e-10!63;UBERON:0001015!3.01e-10!63;UBERON:0000383!3.01e-10!63;UBERON:0001009!5.98e-10!113;UBERON:0004872!2.13e-09!84;UBERON:0003081!5.76e-09!216;UBERON:0003104!2.49e-08!238;UBERON:0009142!2.49e-08!238;UBERON:0004573!6.06e-08!33;UBERON:0004571!6.06e-08!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.36e-08;42!UBERON:0003509;6.36e-08;42!UBERON:0004572;6.36e-08;42!UBERON:0007500;1.85e-07;56!UBERON:0001981;1.85e-07;56!UBERON:0004537;1.85e-07;56!UBERON:0003914;2.47e-07;74!UBERON:0004573;3.59e-07;33!UBERON:0004571;3.59e-07;33!UBERON:0000055;9.39e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001637;6.36e-08;42!UBERON:0003509;6.36e-08;42!UBERON:0004572;6.36e-08;42!UBERON:0007500;1.85e-07;56!UBERON:0001981;1.85e-07;56!UBERON:0004537;1.85e-07;56!UBERON:0003914;2.47e-07;74!UBERON:0004573;3.59e-07;33!UBERON:0004571;3.59e-07;33!UBERON:0000055;9.39e-07;65 | ||
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| ||
|short_description=p1@LASP1 | |short_description=p1@LASP1 | ||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p1@LASP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LASP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443937_5end |
EntrezGene: | LASP1 |
HGNC: | 6513 |
UniProt: | B4DIC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.65e-24 | 121 |
fibroblast | 3.99e-13 | 76 |
smooth muscle cell | 2.81e-12 | 43 |
smooth muscle myoblast | 2.81e-12 | 43 |
muscle precursor cell | 4.67e-12 | 58 |
myoblast | 4.67e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.67e-12 | 58 |
embryonic cell | 4.95e-11 | 250 |
muscle cell | 5.80e-11 | 55 |
lining cell | 1.99e-10 | 58 |
barrier cell | 1.99e-10 | 58 |
vascular associated smooth muscle cell | 4.15e-10 | 32 |
multi fate stem cell | 1.21e-09 | 427 |
somatic stem cell | 5.45e-09 | 433 |
electrically responsive cell | 5.02e-08 | 61 |
electrically active cell | 5.02e-08 | 61 |
meso-epithelial cell | 8.59e-08 | 45 |
stem cell | 1.65e-07 | 441 |
endothelial cell | 4.06e-07 | 36 |