FFCP PHASE1:Hg19::chr18:53069389..53069416,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_uc010xdv.1_5end | |||
|cluster_id=chr18:53069389..53069416,- | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_40_at_TCF4_5end | |||
|id=chr18:53069389..53069416,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.08e-13;6!CL:0000404;4.08e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.89e-17,8;CL:0000540,4.09e-13,6;CL:0000031,4.09e-13,6;CL:0000404,4.09e-13,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.08e-13;6!UBERON:0005425;3.39e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.94e-42!86;UBERON:0001017!9.58e-42!82;UBERON:0000073!1.34e-40!94;UBERON:0001016!1.34e-40!94;UBERON:0001049!4.78e-37!57;UBERON:0005068!4.78e-37!57;UBERON:0006241!4.78e-37!57;UBERON:0007135!4.78e-37!57;UBERON:0000955!2.63e-35!69;UBERON:0006238!2.63e-35!69;UBERON:0002616!2.67e-33!59;UBERON:0002780!4.77e-31!41;UBERON:0001890!4.77e-31!41;UBERON:0006240!4.77e-31!41;UBERON:0001893!6.97e-31!34;UBERON:0002020!2.26e-30!34;UBERON:0003528!2.26e-30!34;UBERON:0003080!5.09e-30!42;UBERON:0002791!1.37e-29!33;UBERON:0001869!5.87e-29!32;UBERON:0003075!6.06e-27!86;UBERON:0007284!6.06e-27!86;UBERON:0002346!1.91e-26!90;UBERON:0007023!1.36e-24!115;UBERON:0000956!4.07e-24!25;UBERON:0000203!4.07e-24!25;UBERON:0003056!1.81e-21!61;UBERON:0002619!2.96e-21!22;UBERON:0000033!1.12e-19!123;UBERON:0000153!1.79e-19!129;UBERON:0007811!1.79e-19!129;UBERON:0001950!6.65e-19!20;UBERON:0000924!6.19e-17!173;UBERON:0006601!6.19e-17!173;UBERON:0004121!6.60e-17!169;UBERON:0000025!1.58e-14!194;UBERON:0004111!8.31e-13!241;UBERON:0000477!2.23e-11!286;UBERON:0000475!1.06e-10!365;UBERON:0000483!1.59e-10!309;UBERON:0000119!3.39e-10!312;UBERON:0000468!6.55e-10!659;UBERON:0000064!8.03e-09!219;UBERON:0000200!1.25e-08!6;UBERON:0004732!1.71e-08!13;UBERON:0003076!3.02e-08!15;UBERON:0003057!3.02e-08!15;UBERON:0000467!6.49e-08!625;UBERON:0000480!7.67e-08!626;UBERON:0001872!8.39e-08!5;UBERON:0002308!1.01e-07!9;UBERON:0000125!1.01e-07!9;UBERON:0004733!2.22e-07!12;UBERON:0002028!2.22e-07!12;UBERON:0007277!2.22e-07!12;UBERON:0002050!7.74e-07!605;UBERON:0005423!7.74e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.08e-18;20!UBERON:0001869;8.47e-17;32!UBERON:0002619;2.94e-16;22!UBERON:0001872;5.90e-15;5!UBERON:0001893;1.36e-14;34!UBERON:0000956;2.69e-14;25!UBERON:0000203;2.69e-14;25!UBERON:0003528;2.96e-13;34!UBERON:0002020;2.96e-13;34!UBERON:0002791;3.71e-13;32!UBERON:0001016;1.91e-11;83!UBERON:0002780;7.72e-11;41!UBERON:0001890;7.72e-11;41!UBERON:0001882;3.39e-09;1!UBERON:0002022;3.39e-09;1!UBERON:0000941;3.39e-09;1!UBERON:0001785;3.39e-09;1!UBERON:0002464;3.39e-09;1!UBERON:0004904;3.39e-09;1!UBERON:0001021;3.39e-09;1!UBERON:0007190;3.39e-09;1!UBERON:0005403;3.39e-09;1!UBERON:0000073;6.10e-09;53!UBERON:0002616;6.10e-09;53!UBERON:0001017;1.16e-07;75!UBERON:0000955;1.29e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.40e-25,89;UBERON:0001017,6.48e-22,81;UBERON:0001869,3.47e-18,32;UBERON:0001950,6.74e-18,20;UBERON:0001893,4.50e-17,34;UBERON:0002619,2.81e-16,22;UBERON:0001872,4.65e-15,5;UBERON:0002791,2.28e-14,32;UBERON:0000956,2.58e-14,25;UBERON:0000203,2.58e-14,25;UBERON:0000955,2.82e-14,68;UBERON:0006238,2.82e-14,68;UBERON:0002780,5.19e-14,41;UBERON:0001890,5.19e-14,41;UBERON:0003080,5.19e-14,41;UBERON:0006240,5.19e-14,41;UBERON:0003528,1.73e-13,34;UBERON:0002020,1.73e-13,34;UBERON:0004121,2.45e-13,171;UBERON:0000924,2.45e-13,171;UBERON:0006601,2.45e-13,171;UBERON:0000073,3.94e-13,53;UBERON:0002616,3.94e-13,53;UBERON:0001049,2.34e-12,56;UBERON:0005068,2.34e-12,56;UBERON:0006241,2.34e-12,56;UBERON:0007135,2.34e-12,56;UBERON:0003056,3.22e-11,61;UBERON:0002346,4.34e-11,86;UBERON:0011216,1.08e-10,223;UBERON:0003075,9.76e-10,82;UBERON:0007284,9.76e-10,82;UBERON:0007190,2.16e-09,1;UBERON:0000941,3.25e-09,1;UBERON:0001785,3.25e-09,1;UBERON:0002464,3.25e-09,1;UBERON:0004904,3.25e-09,1;UBERON:0001021,3.25e-09,1;UBERON:0003902,3.25e-09,1;UBERON:0005425,3.25e-09,1;UBERON:0002022,3.83e-09,1;UBERON:0001882,5.28e-09,1;UBERON:0005403,5.28e-09,1;UBERON:0010371,2.56e-07,104 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0.246242116153576,0,0,0.286235987131057,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.66944122552934,0.402829317109147,1.52054421143703,0,0.367663080345869,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,0.506328996723799,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,9.10978977003352,6.18631050222156,8.54332953205179,5.10351001322531,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.640695746278505,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0.19924798825107,0,0,0.818149460017238,0,0,0,0,0,0.197286811273867,0,0,0,1.20598527610407,3.99227596002388,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,1.52581736317083,0.774054819518572,0.295547618953547,0.87754158861589,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.265372693510018,0.611030144933625,0,0,0,0.404406797884062,0.802577647298789,0.468528891450678,0,0,0,0,0,3.67287313956588,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,1.39283751102933,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.732219924186332,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0,0.403100834920358,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0,0,0,1.33649024647654,0,0.0788057072991982,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0.886068179966986,0.610131324509816,0.751145584238999,0,0.554645257684261,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88719130227076,0,0,2.33832412111851,0,0,0,0,0,0.352675943690684,0.3062454773532,1.09189682663981,0,0.798169295285756,0.41023272848151,2.26864526599546,0.96820153449905,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.62090203084147,1.56215619722769,1.44680757550829,0.760989722326882,3.28184885410932,0,0,0,0,0,0,0,0.227662191351298,0.620916591138472,0,0,0.951576261675644,0.657727735628491,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,2.3196288626764,0.485710993059139,0,1.19370465096821,0,10.0522013014674,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0.631086248772738,0.611923411718232,1.30905207102113,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0,0,0,0,0,0.665320713092027,0,0.106727345877715,0,0,0,0.733448665097199,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p40@TCF4 | |||
}} |
Latest revision as of 20:58, 19 September 2015
Short description: | p40@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_TCF4_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 20bp_to_uc010xdv.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.89e-17 | 8 |
neuron | 4.09e-13 | 6 |
neuroblast | 4.09e-13 | 6 |
electrically signaling cell | 4.09e-13 | 6 |