FFCP PHASE1:Hg19::chr6:76311568..76311623,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:76311568..76311623,+ to FFCP PHASE1:Hg19::chr6:76311568..76311623,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26054 | |EntrezGene=26054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20944 | |HGNC=20944 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQN6,F5GZW5,B3KMM0,Q9GZR1 | |UniProt=E7EQN6,F5GZW5,B3KMM0,Q9GZR1 | ||
|association_with_transcript=0bp_to_ENST00000370014,ENST00000538088,NM_001100409,NM_015571,uc003pic.2,uc003pid.3,uc003pie.3_5end | |||
|cluster_id=chr6:76311568..76311623,+ | |||
|description=CAGE_peak_1_at_SENP6_5end | |||
|id=chr6:76311568..76311623,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.09e-09!52;CL:0000542!1.94e-09!53;CL:0000051!1.94e-09!53;CL:0000791!7.48e-09!18;CL:0000789!7.48e-09!18;CL:0002420!7.48e-09!18;CL:0002419!7.48e-09!18;CL:0000790!7.48e-09!18;CL:0000625!6.94e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.89e-09;18!CL:0000789;6.89e-09;18!CL:0002419;6.89e-09;18!CL:0000625;7.00e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.09e-09,52;CL:0000542,1.94e-09,53;CL:0000051,1.94e-09,53;CL:0000791,7.48e-09,18;CL:0000789,7.48e-09,18;CL:0002420,7.48e-09,18;CL:0002419,7.48e-09,18;CL:0000790,7.48e-09,18;CL:0000625,6.94e-08,11;CL:0000037,5.13e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;6.89e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.80e-33!115;UBERON:0001049!1.13e-10!57;UBERON:0005068!1.13e-10!57;UBERON:0006241!1.13e-10!57;UBERON:0007135!1.13e-10!57;UBERON:0000073!8.20e-10!94;UBERON:0001016!8.20e-10!94;UBERON:0003080!5.01e-09!42;UBERON:0002780!1.05e-08!41;UBERON:0001890!1.05e-08!41;UBERON:0006240!1.05e-08!41;UBERON:0002616!1.47e-08!59;UBERON:0005743!3.60e-08!86;UBERON:0001017!5.28e-08!82;UBERON:0002346!1.03e-07!90;UBERON:0000955!2.05e-07!69;UBERON:0006238!2.05e-07!69;UBERON:0003075!3.70e-07!86;UBERON:0007284!3.70e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.20e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.72e-32,114;UBERON:0001049,2.36e-10,56;UBERON:0005068,2.36e-10,56;UBERON:0006241,2.36e-10,56;UBERON:0007135,2.36e-10,56;UBERON:0000073,9.76e-10,53;UBERON:0002616,9.76e-10,53;UBERON:0001016,2.27e-09,89;UBERON:0002780,1.05e-08,41;UBERON:0001890,1.05e-08,41;UBERON:0003080,1.05e-08,41;UBERON:0006240,1.05e-08,41;UBERON:0001017,9.66e-08,81;UBERON:0002346,2.15e-07,86;UBERON:0000955,3.77e-07,68;UBERON:0006238,3.77e-07,68;UBERON:0003075,7.64e-07,82;UBERON:0007284,7.64e-07,82 | |||
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| ||
|short_description=p1@SENP6 | |||
}} | }} |
Latest revision as of 21:01, 19 September 2015
Short description: | p1@SENP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SENP6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370014, ENST00000538088, NM_001100409, NM_015571, uc003pic.2, uc003pid.3, uc003pie.3_5end |
EntrezGene: | SENP6 |
HGNC: | 20944 |
UniProt: | E7EQN6F5GZW5B3KMM0Q9GZR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.09e-09 | 52 |
lymphocyte | 1.94e-09 | 53 |
common lymphoid progenitor | 1.94e-09 | 53 |
mature alpha-beta T cell | 7.48e-09 | 18 |
alpha-beta T cell | 7.48e-09 | 18 |
immature T cell | 7.48e-09 | 18 |
mature T cell | 7.48e-09 | 18 |
immature alpha-beta T cell | 7.48e-09 | 18 |
CD8-positive, alpha-beta T cell | 6.94e-08 | 11 |
hematopoietic stem cell | 5.13e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.72e-32 | 114 |
neural tube | 2.36e-10 | 56 |
neural rod | 2.36e-10 | 56 |
future spinal cord | 2.36e-10 | 56 |
neural keel | 2.36e-10 | 56 |
regional part of nervous system | 9.76e-10 | 53 |
regional part of brain | 9.76e-10 | 53 |
nervous system | 2.27e-09 | 89 |
regional part of forebrain | 1.05e-08 | 41 |
forebrain | 1.05e-08 | 41 |
anterior neural tube | 1.05e-08 | 41 |
future forebrain | 1.05e-08 | 41 |
central nervous system | 9.66e-08 | 81 |
neurectoderm | 2.15e-07 | 86 |
brain | 3.77e-07 | 68 |
future brain | 3.77e-07 | 68 |
neural plate | 7.64e-07 | 82 |
presumptive neural plate | 7.64e-07 | 82 |