FFCP PHASE1:Hg19::chr1:93544821..93544861,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29535 | |||
|TSSclassifier=strong | |||
|UniProt=F5GXQ2 | |||
|association_with_transcript=0bp_to_ENST00000473430,ENST00000474314,ENST00000494963,ENST00000537953_5end | |||
|cluster_id=chr1:93544821..93544861,+ | |||
|description=CAGE_peak_1_at_MTF2_5end | |||
|id=chr1:93544821..93544861,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.39e-30!172;CL:0000566!7.39e-30!172;CL:0002032!4.35e-27!165;CL:0000837!4.35e-27!165;CL:0000988!2.74e-26!182;CL:0000542!3.09e-21!53;CL:0000051!3.09e-21!53;CL:0000838!7.70e-21!52;CL:0000738!1.27e-19!140;CL:0002031!8.30e-17!124;CL:0002087!7.91e-15!119;CL:0000945!2.58e-11!24;CL:0000826!2.58e-11!24;CL:0000084!1.97e-09!25;CL:0000827!1.97e-09!25;CL:0000763!2.29e-09!112;CL:0000049!2.29e-09!112;CL:0000236!9.85e-08!14;CL:0000791!1.35e-07!18;CL:0000789!1.35e-07!18;CL:0002420!1.35e-07!18;CL:0002419!1.35e-07!18;CL:0000790!1.35e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.21e-12;53!CL:0000945;2.33e-11;24!CL:0000084;2.19e-09;25!CL:0000791;1.34e-07;18!CL:0000789;1.34e-07;18!CL:0002419;1.34e-07;18!CL:0000236;2.52e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.99e-29,168;CL:0002032,1.15e-26,161;CL:0000837,1.15e-26,161;CL:0000988,1.63e-26,177;CL:0000542,3.08e-21,53;CL:0000051,3.08e-21,53;CL:0000838,7.67e-21,52;CL:0000738,3.12e-19,136;CL:0002031,1.95e-16,120;CL:0002087,1.84e-14,115;CL:0000945,2.58e-11,24;CL:0000826,2.58e-11,24;CL:0000084,1.97e-09,25;CL:0000827,1.97e-09,25;CL:0000763,5.10e-09,108;CL:0000049,5.10e-09,108;CL:0000236,9.84e-08,14;CL:0000791,1.35e-07,18;CL:0000789,1.35e-07,18;CL:0002420,1.35e-07,18;CL:0002419,1.35e-07,18;CL:0000790,1.35e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.21e-12;53!CL:0000790;1.34e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!2.51e-15!51;DOID:0060083!2.51e-15!51;DOID:162!1.63e-14!235;DOID:1240!2.69e-13!39;DOID:14566!4.18e-13!239;DOID:8692!2.44e-10!31;DOID:0050686!6.72e-10!137;DOID:0050687!2.08e-07!143;DOID:3095!8.10e-07!22;DOID:2994!8.10e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.12e-11;39!DOID:8692;4.80e-10;31!DOID:2531;9.91e-10;51!DOID:0060083;9.91e-10;51!DOID:3095;8.57e-07;22!DOID:2994;8.57e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.51e-15,51;DOID:0060083,2.51e-15,51;DOID:162,1.64e-14,235;DOID:1240,2.69e-13,39;DOID:14566,4.46e-13,239;DOID:8692,2.43e-10,31;DOID:0050686,6.95e-10,137;DOID:0050687,2.09e-07,143;DOID:3095,7.70e-07,22;DOID:2994,7.70e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.28e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.02e-07,89 | |||
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| |||
|short_description=p1@MTF2 | |||
}} |
Latest revision as of 21:11, 19 September 2015
Short description: | p1@MTF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473430, ENST00000474314, ENST00000494963, ENST00000537953_5end |
EntrezGene: | MTF2 |
HGNC: | 29535 |
UniProt: | F5GXQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.99e-29 | 168 |
hematopoietic oligopotent progenitor cell | 1.15e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-26 | 161 |
hematopoietic cell | 1.63e-26 | 177 |
lymphocyte | 3.08e-21 | 53 |
common lymphoid progenitor | 3.08e-21 | 53 |
lymphoid lineage restricted progenitor cell | 7.67e-21 | 52 |
leukocyte | 3.12e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.95e-16 | 120 |
nongranular leukocyte | 1.84e-14 | 115 |
lymphocyte of B lineage | 2.58e-11 | 24 |
pro-B cell | 2.58e-11 | 24 |
T cell | 1.97e-09 | 25 |
pro-T cell | 1.97e-09 | 25 |
myeloid cell | 5.10e-09 | 108 |
common myeloid progenitor | 5.10e-09 | 108 |
B cell | 9.84e-08 | 14 |
mature alpha-beta T cell | 1.35e-07 | 18 |
alpha-beta T cell | 1.35e-07 | 18 |
immature T cell | 1.35e-07 | 18 |
mature T cell | 1.35e-07 | 18 |
immature alpha-beta T cell | 1.35e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.02e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.51e-15 | 51 |
immune system cancer | 2.51e-15 | 51 |
cancer | 1.64e-14 | 235 |
leukemia | 2.69e-13 | 39 |
disease of cellular proliferation | 4.46e-13 | 239 |
myeloid leukemia | 2.43e-10 | 31 |
organ system cancer | 6.95e-10 | 137 |
cell type cancer | 2.09e-07 | 143 |
germ cell and embryonal cancer | 7.70e-07 | 22 |
germ cell cancer | 7.70e-07 | 22 |