FFCP PHASE1:Hg19::chr7:87105337..87105344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5244 | |EntrezGene=5244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=45 | |HGNC=45 | ||
|TSSclassifier=strong | |||
|UniProt=P21439 | |UniProt=P21439 | ||
|association_with_transcript=-282bp_to_ENST00000265723_5end | |association_with_transcript=-282bp_to_ENST00000265723_5end | ||
|cluster_id=chr7:87105337..87105344,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_3_at_ABCB4_5end | |description=CAGE_peak_3_at_ABCB4_5end |
Latest revision as of 21:13, 19 September 2015
Short description: | p3@ABCB4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABCB4_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -282bp_to_ENST00000265723_5end |
EntrezGene: | ABCB4 |
HGNC: | 45 |
UniProt: | P21439 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@ABCB4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.55e-82 | 14 |
lymphocyte of B lineage | 3.25e-47 | 24 |
pro-B cell | 3.25e-47 | 24 |
lymphocyte | 9.25e-24 | 53 |
common lymphoid progenitor | 9.25e-24 | 53 |
lymphoid lineage restricted progenitor cell | 1.08e-20 | 52 |
nongranular leukocyte | 1.34e-09 | 115 |
leukocyte | 3.78e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 1.07e-07 | 120 |
hematopoietic oligopotent progenitor cell | 2.39e-07 | 161 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
spleen | 1.51e-11 | 3 |
gastrointestinal system mesentery | 1.51e-11 | 3 |
stomach region | 1.51e-11 | 3 |
mesentery | 1.51e-11 | 3 |
gastrointestinal system serosa | 1.51e-11 | 3 |
mesentery of stomach | 1.51e-11 | 3 |
gut mesentery | 1.51e-11 | 3 |
dorsal mesentery | 1.51e-11 | 3 |
dorsal mesogastrium | 1.51e-11 | 3 |
peritoneal cavity | 1.51e-11 | 3 |
Showing 1 to 10 of 19 entries