FFCP PHASE1:Hg19::chr18:53177899..53177918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B3KUC0 | |UniProt=B3KUC0 | ||
|association_with_transcript=81bp_to_ENST00000543082,NM_001243231,uc002lfy.2_5end | |association_with_transcript=81bp_to_ENST00000543082,NM_001243231,uc002lfy.2_5end | ||
|cluster_id=chr18:53177899..53177918,- | |||
|description=CAGE_peak_33_at_TCF4_5end | |description=CAGE_peak_33_at_TCF4_5end | ||
|id=chr18:53177899..53177918,- | |id=chr18:53177899..53177918,- | ||
|ontology_enrichment_celltype=CL:0002139!2.15e-16!24;CL:0000071!1.82e-10!18;CL:0002546!1.82e-10!18;CL:0000115!5.16e-10!35;CL:0005020!5.51e-08!6;CL:0002138!5.51e-08!6;CL:0005022!5.51e-08!6;CL:0002543!2.37e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.15e-16!24;CL:0000071!1.82e-10!18;CL:0002546!1.82e-10!18;CL:0000115!5.16e-10!35;CL:0005020!5.51e-08!6;CL:0002138!5.51e-08!6;CL:0005022!5.51e-08!6;CL:0002543!2.37e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.92e-16;6!CL:0002139;3.00e-11;24!CL:0002543;6.95e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.14e-16,6;CL:0002138,1.14e-16,6;CL:0005022,1.14e-16,6;CL:0002139,2.37e-11,24;CL:0002543,6.66e-10,6;CL:0000115,5.02e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;1.92e-16;6!UBERON:0004872;2.69e-13;7!UBERON:0006965;3.12e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.46e-44!115;UBERON:0004111!1.69e-18!241;UBERON:0001049!5.50e-17!57;UBERON:0005068!5.50e-17!57;UBERON:0006241!5.50e-17!57;UBERON:0007135!5.50e-17!57;UBERON:0000025!8.61e-17!194;UBERON:0000477!4.86e-15!286;UBERON:0003075!4.79e-13!86;UBERON:0007284!4.79e-13!86;UBERON:0002780!6.92e-13!41;UBERON:0001890!6.92e-13!41;UBERON:0006240!6.92e-13!41;UBERON:0002616!1.40e-12!59;UBERON:0002346!1.45e-12!90;UBERON:0003080!2.21e-12!42;UBERON:0002020!2.82e-12!34;UBERON:0003528!2.82e-12!34;UBERON:0000055!7.11e-12!69;UBERON:0001893!1.04e-11!34;UBERON:0002791!3.53e-11!33;UBERON:0001017!5.66e-11!82;UBERON:0005743!1.51e-10!86;UBERON:0001869!1.65e-10!32;UBERON:0004872!1.65e-10!84;UBERON:0001986!1.82e-10!18;UBERON:0004638!1.82e-10!18;UBERON:0004852!1.82e-10!18;UBERON:0000955!2.62e-10!69;UBERON:0006238!2.62e-10!69;UBERON:0000073!7.99e-10!94;UBERON:0001016!7.99e-10!94;UBERON:0002308!4.72e-09!9;UBERON:0000125!4.72e-09!9;UBERON:0002049!5.24e-09!79;UBERON:0007798!5.24e-09!79;UBERON:0001981!6.48e-09!60;UBERON:0007500!6.48e-09!60;UBERON:0004537!6.48e-09!60;UBERON:0006965!6.48e-09!60;UBERON:0001009!2.82e-08!113;UBERON:0004535!3.88e-08!110;UBERON:0000487!8.87e-08!22;UBERON:0002619!1.25e-07!22;UBERON:0000483!1.72e-07!309;UBERON:0000119!3.28e-07!312;UBERON:0009663!4.29e-07!7;UBERON:0002420!7.69e-07!9;UBERON:0007245!7.69e-07!9;UBERON:0010009!7.69e-07!9;UBERON:0010011!7.69e-07!9;UBERON:0000454!7.69e-07!9;UBERON:0003056!9.90e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!9.46e-44!115;UBERON:0004111!1.69e-18!241;UBERON:0001049!5.50e-17!57;UBERON:0005068!5.50e-17!57;UBERON:0006241!5.50e-17!57;UBERON:0007135!5.50e-17!57;UBERON:0000025!8.61e-17!194;UBERON:0000477!4.86e-15!286;UBERON:0003075!4.79e-13!86;UBERON:0007284!4.79e-13!86;UBERON:0002780!6.92e-13!41;UBERON:0001890!6.92e-13!41;UBERON:0006240!6.92e-13!41;UBERON:0002616!1.40e-12!59;UBERON:0002346!1.45e-12!90;UBERON:0003080!2.21e-12!42;UBERON:0002020!2.82e-12!34;UBERON:0003528!2.82e-12!34;UBERON:0000055!7.11e-12!69;UBERON:0001893!1.04e-11!34;UBERON:0002791!3.53e-11!33;UBERON:0001017!5.66e-11!82;UBERON:0005743!1.51e-10!86;UBERON:0001869!1.65e-10!32;UBERON:0004872!1.65e-10!84;UBERON:0001986!1.82e-10!18;UBERON:0004638!1.82e-10!18;UBERON:0004852!1.82e-10!18;UBERON:0000955!2.62e-10!69;UBERON:0006238!2.62e-10!69;UBERON:0000073!7.99e-10!94;UBERON:0001016!7.99e-10!94;UBERON:0002308!4.72e-09!9;UBERON:0000125!4.72e-09!9;UBERON:0002049!5.24e-09!79;UBERON:0007798!5.24e-09!79;UBERON:0001981!6.48e-09!60;UBERON:0007500!6.48e-09!60;UBERON:0004537!6.48e-09!60;UBERON:0006965!6.48e-09!60;UBERON:0001009!2.82e-08!113;UBERON:0004535!3.88e-08!110;UBERON:0000487!8.87e-08!22;UBERON:0002619!1.25e-07!22;UBERON:0000483!1.72e-07!309;UBERON:0000119!3.28e-07!312;UBERON:0009663!4.29e-07!7;UBERON:0002420!7.69e-07!9;UBERON:0007245!7.69e-07!9;UBERON:0010009!7.69e-07!9;UBERON:0010011!7.69e-07!9;UBERON:0000454!7.69e-07!9;UBERON:0003056!9.90e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.99e-12;8!UBERON:0004536;2.99e-12;8!UBERON:0006558;2.99e-12;8!UBERON:0001638;6.61e-10;9!UBERON:0003920;6.61e-10;9!UBERON:0004582;6.61e-10;9!UBERON:0002465;9.91e-10;10!UBERON:0005090;1.39e-08;2!UBERON:0001630;1.39e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.17e-13,114;UBERON:0001473,2.04e-12,8;UBERON:0004536,2.04e-12,8;UBERON:0006558,2.04e-12,8;UBERON:0001638,4.99e-10,9;UBERON:0003920,4.99e-10,9;UBERON:0004582,4.99e-10,9;UBERON:0002465,7.35e-10,10;UBERON:0005090,1.79e-08,2;UBERON:0001630,1.79e-08,2 | |||
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| ||
|short_description=p33@TCF4 | |short_description=p33@TCF4 | ||
}} | }} |
Latest revision as of 21:14, 19 September 2015
Short description: | p33@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000543082, NM_001243231, uc002lfy.2_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B3KUC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.14e-16 | 6 |
endothelial cell of lymphatic vessel | 1.14e-16 | 6 |
vascular lymphangioblast | 1.14e-16 | 6 |
endothelial cell of vascular tree | 2.37e-11 | 24 |
vein endothelial cell | 6.66e-10 | 6 |
endothelial cell | 5.02e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.17e-13 | 114 |
lymphatic vessel | 2.04e-12 | 8 |
lymph vasculature | 2.04e-12 | 8 |
lymphatic part of lymphoid system | 2.04e-12 | 8 |
vein | 4.99e-10 | 9 |
venous blood vessel | 4.99e-10 | 9 |
venous system | 4.99e-10 | 9 |
lymphoid system | 7.35e-10 | 10 |
muscle structure | 1.79e-08 | 2 |
muscle organ | 1.79e-08 | 2 |