FFCP PHASE1:Hg19::chr17:37356555..37356580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6143 | |EntrezGene=6143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10312 | |HGNC=10312 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWR8 | |UniProt=Q8IWR8 | ||
|association_with_transcript=-14bp_to_uc002hrr.1_5end | |association_with_transcript=-14bp_to_uc002hrr.1_5end | ||
|cluster_id=chr17:37356555..37356580,+ | |||
|description=CAGE_peak_1_at_RPL19_5end | |description=CAGE_peak_1_at_RPL19_5end | ||
|id=chr17:37356555..37356580,+ | |id=chr17:37356555..37356580,+ | ||
|ontology_enrichment_celltype=CL:0000012!1.57e-29!682;CL:0000003!7.93e-28!722;CL:0000548!8.04e-28!679;CL:0000004!8.04e-28!679;CL:0000255!8.04e-28!679;CL:0000144!1.45e-20!625;CL:0002371!6.42e-16!591;CL:0000034!1.57e-12!444;CL:0000063!2.10e-12!578;CL:0000723!4.57e-12!436;CL:0000048!7.44e-12!430;CL:0000838!8.12e-09!52;CL:0000542!9.02e-09!53;CL:0000051!9.02e-09!53;CL:0000791!5.09e-08!18;CL:0000789!5.09e-08!18;CL:0002420!5.09e-08!18;CL:0002419!5.09e-08!18;CL:0000790!5.09e-08!18;CL:0000219!1.13e-07!390;CL:0000183!1.54e-07!59;CL:0000187!3.40e-07!54;CL:0000084!3.59e-07!25;CL:0000827!3.59e-07!25;CL:0002320!4.81e-07!365;CL:0000393!7.45e-07!60;CL:0000211!7.45e-07!60 | |ontology_enrichment_celltype=CL:0000012!1.57e-29!682;CL:0000003!7.93e-28!722;CL:0000548!8.04e-28!679;CL:0000004!8.04e-28!679;CL:0000255!8.04e-28!679;CL:0000144!1.45e-20!625;CL:0002371!6.42e-16!591;CL:0000034!1.57e-12!444;CL:0000063!2.10e-12!578;CL:0000723!4.57e-12!436;CL:0000048!7.44e-12!430;CL:0000838!8.12e-09!52;CL:0000542!9.02e-09!53;CL:0000051!9.02e-09!53;CL:0000791!5.09e-08!18;CL:0000789!5.09e-08!18;CL:0002420!5.09e-08!18;CL:0002419!5.09e-08!18;CL:0000790!5.09e-08!18;CL:0000219!1.13e-07!390;CL:0000183!1.54e-07!59;CL:0000187!3.40e-07!54;CL:0000084!3.59e-07!25;CL:0000827!3.59e-07!25;CL:0002320!4.81e-07!365;CL:0000393!7.45e-07!60;CL:0000211!7.45e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.89e-08;18!CL:0000789;4.89e-08;18!CL:0002419;4.89e-08;18!CL:0000084;3.68e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.40e-12,441;CL:0000723,6.90e-12,433;CL:0000048,1.11e-11,427;CL:0000838,8.12e-09,52;CL:0000542,9.02e-09,53;CL:0000051,9.02e-09,53;CL:0000791,5.09e-08,18;CL:0000789,5.09e-08,18;CL:0002420,5.09e-08,18;CL:0002419,5.09e-08,18;CL:0000790,5.09e-08,18;CL:0000219,1.06e-07,386;CL:0000084,3.59e-07,25;CL:0000827,3.59e-07,25;CL:0002320,4.46e-07,361;CL:0000187,8.49e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000790;4.89e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.86e-07!70 | |ontology_enrichment_uberon=UBERON:0004290!1.86e-07!70 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,4.17e-07,71;UBERON:0003059,4.17e-07,71;UBERON:0007282,4.17e-07,71;UBERON:0004290,4.17e-07,71;UBERON:0009618,4.17e-07,71 | |||
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20684304392 | ||
|short_description=p1@RPL19 | |short_description=p1@RPL19 | ||
}} | }} |
Latest revision as of 21:24, 19 September 2015
Short description: | p1@RPL19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL19_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_uc002hrr.1_5end |
EntrezGene: | RPL19 |
HGNC: | 10312 |
UniProt: | Q8IWR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.40e-12 | 441 |
somatic stem cell | 6.90e-12 | 433 |
multi fate stem cell | 1.11e-11 | 427 |
lymphoid lineage restricted progenitor cell | 8.12e-09 | 52 |
lymphocyte | 9.02e-09 | 53 |
common lymphoid progenitor | 9.02e-09 | 53 |
mature alpha-beta T cell | 5.09e-08 | 18 |
alpha-beta T cell | 5.09e-08 | 18 |
immature T cell | 5.09e-08 | 18 |
mature T cell | 5.09e-08 | 18 |
immature alpha-beta T cell | 5.09e-08 | 18 |
motile cell | 1.06e-07 | 386 |
T cell | 3.59e-07 | 25 |
pro-T cell | 3.59e-07 | 25 |
connective tissue cell | 4.46e-07 | 361 |
muscle cell | 8.49e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
somite | 4.17e-07 | 71 |
presomitic mesoderm | 4.17e-07 | 71 |
presumptive segmental plate | 4.17e-07 | 71 |
dermomyotome | 4.17e-07 | 71 |
trunk paraxial mesoderm | 4.17e-07 | 71 |