FFCP PHASE1:Hg19::chr17:37356620..37356631,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:37356620..37356631,+
|short_description=p5@RPL19
|description=CAGE_peak_5_at_RPL19_5end
|association_with_transcript=25bp_to_uc002hrr.1_5end
|EntrezGene=...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6143 | |EntrezGene=6143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10312 | |HGNC=10312 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWR8 | |UniProt=Q8IWR8 | ||
|association_with_transcript=25bp_to_uc002hrr.1_5end | |||
|cluster_id=chr17:37356620..37356631,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_5_at_RPL19_5end | |||
|id=chr17:37356620..37356631,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.37e-16;3!CL:0000623;1.37e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.52e-17,3;CL:0000623,2.04e-16,3;CL:0000825,2.04e-16,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.07e-11!235;DOID:305!1.62e-11!106;DOID:14566!2.68e-11!239;DOID:0050687!6.29e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:154;3.59e-07;2!DOID:4236;3.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,3.48e-07,2;DOID:4236,3.48e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@RPL19 | |||
}} | }} |
Latest revision as of 21:25, 19 September 2015
Short description: | p5@RPL19 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RPL19_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 25bp_to_uc002hrr.1_5end |
EntrezGene: | RPL19 |
HGNC: | 10312 |
UniProt: | Q8IWR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.52e-17 | 3 |
natural killer cell | 2.04e-16 | 3 |
pro-NK cell | 2.04e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 3.48e-07 | 2 |
carcinosarcoma | 3.48e-07 | 2 |