FFCP PHASE1:Hg19::chr14:36988882..36988895,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000498187_5end | |||
|cluster_id=chr14:36988882..36988895,- | |||
|coexpression_cluster_id=C1393 | |||
|description=CAGE_peak_13_at_NKX2-1_5end | |||
|id=chr14:36988882..36988895,- | |||
|ontology_enrichment_celltype=CL:0000322!1.77e-11!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.35e-40;5!UBERON:0008947;1.67e-07;29!UBERON:0001041;2.84e-07;30 | |||
|ontology_enrichment_disease=DOID:3112!1.69e-09!1;DOID:0060060!4.87e-09!1;DOID:0060061!4.87e-09!1;DOID:8691!4.87e-09!1;DOID:3908!2.51e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!1.23e-26!5;UBERON:0004117!1.23e-26!5;UBERON:0007689!1.23e-26!5;UBERON:0007123!1.23e-26!5;UBERON:0003091!1.23e-26!5;UBERON:0000341!5.08e-17!2;UBERON:0002048!7.69e-13!22;UBERON:0000117!7.69e-13!22;UBERON:0000171!7.69e-13!22;UBERON:0000170!7.69e-13!22;UBERON:0005597!7.69e-13!22;UBERON:0000118!7.69e-13!22;UBERON:0009722!3.13e-12!11;UBERON:0007690!3.13e-12!11;UBERON:0005911!4.23e-12!82;UBERON:0004821!1.77e-11!3;UBERON:0003215!1.77e-11!3;UBERON:0002299!1.77e-11!3;UBERON:0006524!1.77e-11!3;UBERON:0008874!1.77e-11!3;UBERON:0002169!1.77e-11!3;UBERON:0004894!1.77e-11!3;UBERON:0005153!6.26e-10!37;UBERON:0002171!1.03e-09!1;UBERON:0006518!1.03e-09!1;UBERON:0008949!1.03e-09!1;UBERON:0000101!1.03e-09!1;UBERON:0002167!1.03e-09!1;UBERON:0008814!5.25e-09!15;UBERON:0005178!3.92e-08!34;UBERON:0002224!3.92e-08!34;UBERON:0005181!6.92e-08!35;UBERON:0008947!3.19e-07!38;UBERON:0003258!3.19e-07!38;UBERON:0005157!5.50e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.35e-40;5!UBERON:0002171;2.34e-23;1!UBERON:0006518;2.34e-23;1!UBERON:0008949;2.34e-23;1!UBERON:0000101;2.34e-23;1!UBERON:0002167;2.34e-23;1!UBERON:0000341;3.06e-12;2!UBERON:0002048;1.06e-09;22!UBERON:0000117;1.06e-09;22!UBERON:0000171;1.06e-09;22!UBERON:0000170;1.06e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.98e-40,5;UBERON:0004117,4.98e-40,5;UBERON:0007689,4.98e-40,5;UBERON:0007123,4.98e-40,5;UBERON:0003091,4.98e-40,5;UBERON:0002171,2.10e-23,1;UBERON:0006518,2.10e-23,1;UBERON:0008949,2.10e-23,1;UBERON:0000101,2.10e-23,1;UBERON:0002167,2.10e-23,1;UBERON:0009722,1.17e-18,11;UBERON:0007690,1.17e-18,11;UBERON:0000341,2.59e-12,2;UBERON:0008814,1.11e-11,18;UBERON:0002048,1.09e-09,22;UBERON:0000117,1.09e-09,22;UBERON:0000171,1.09e-09,22;UBERON:0000170,1.09e-09,22;UBERON:0005597,1.09e-09,22;UBERON:0000118,1.09e-09,22;UBERON:0005911,1.13e-09,82 | |||
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|short_description=p13@NKX2-1 | |||
}} | }} |
Latest revision as of 22:28, 19 September 2015
Short description: | p13@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_NKX2-1_5end |
Coexpression cluster: | C1393_thyroid_lung_throat_Alveolar_small_nonsmall_papillary |
Association with transcript: | 2bp_to_ENST00000498187_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.98e-40 | 5 |
pharyngeal pouch | 4.98e-40 | 5 |
thyroid diverticulum | 4.98e-40 | 5 |
pharyngeal pouch 2 | 4.98e-40 | 5 |
thyroid primordium | 4.98e-40 | 5 |
lower lobe of right lung | 2.10e-23 | 1 |
right lung lobe | 2.10e-23 | 1 |
lower lobe of lung | 2.10e-23 | 1 |
lobe of lung | 2.10e-23 | 1 |
right lung | 2.10e-23 | 1 |
entire pharyngeal arch endoderm | 1.17e-18 | 11 |
early pharyngeal endoderm | 1.17e-18 | 11 |
throat | 2.59e-12 | 2 |
pharyngeal arch system | 1.11e-11 | 18 |
lung | 1.09e-09 | 22 |
respiratory tube | 1.09e-09 | 22 |
respiration organ | 1.09e-09 | 22 |
pair of lungs | 1.09e-09 | 22 |
lung primordium | 1.09e-09 | 22 |
lung bud | 1.09e-09 | 22 |
endo-epithelium | 1.13e-09 | 82 |