FFCP PHASE1:Hg19::chr22:33255620..33255635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_X80791_5end | |association_with_transcript=157bp_to_X80791_5end | ||
|cluster_id=chr22:33255620..33255635,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_10_at_TIMP3_5end | |description=CAGE_peak_10_at_TIMP3_5end | ||
|id=chr22:33255620..33255635,+ | |id=chr22:33255620..33255635,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.52e-08!75;CL:0002334!6.58e-07!12 | |ontology_enrichment_celltype=CL:0000057!1.52e-08!75;CL:0002334!6.58e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.44e-12;12!CL:0002620;1.26e-08;23!CL:0000136;2.40e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.56e-12,76;CL:0002334,2.40e-12,12;CL:0002620,1.29e-08,23;CL:0000136,7.74e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.85e-07;4!UBERON:0007284;3.85e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.32e-07;5!DOID:450;3.32e-07;5!DOID:66;3.32e-07;5!DOID:423;3.32e-07;5!DOID:0080000;3.32e-07;5!DOID:11722;3.32e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.70e-07,5;DOID:450,6.70e-07,5;DOID:66,6.70e-07,5;DOID:423,6.70e-07,5;DOID:0080000,6.70e-07,5;DOID:11722,6.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.81e-11!115;UBERON:0004923!4.08e-10!57;UBERON:0000475!3.99e-07!365;UBERON:0005631!7.42e-07!14;UBERON:0000158!7.42e-07!14;UBERON:0003102!8.23e-07!95 | |ontology_enrichment_uberon=UBERON:0007023!3.81e-11!115;UBERON:0004923!4.08e-10!57;UBERON:0000475!3.99e-07!365;UBERON:0005631!7.42e-07!14;UBERON:0000158!7.42e-07!14;UBERON:0003102!8.23e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.34e-10;9!UBERON:0000042;8.34e-10;9!UBERON:0003688;6.92e-09;6!UBERON:0002358;6.92e-09;6!UBERON:0003684;6.92e-09;6!UBERON:0001178;6.92e-09;6!UBERON:0005631;6.49e-08;10!UBERON:0000158;6.49e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,3.03e-13,66;UBERON:0003688,5.38e-09,6;UBERON:0002358,5.38e-09,6;UBERON:0003684,5.38e-09,6;UBERON:0001178,5.38e-09,6;UBERON:0004457,1.18e-08,12;UBERON:0000042,1.18e-08,12;UBERON:0005631,1.25e-08,14;UBERON:0000158,1.25e-08,14;UBERON:0002199,6.65e-08,46;UBERON:0002416,6.65e-08,46;UBERON:0004797,1.48e-07,7 | |||
|phase1_expression=1.99846217197612,3.21150785836475,1.83240725324762,4.00293193412522,2.23480547213644,2.61701557230111,2.53299878168311,1.89515962028049,0,0,0,2.40285509343189,0.791300934685361,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,1.0843174571537,0,0,2.3858578411533,1.94653948121054,0.0945348171640679,0.443458794925128,0.263504357079378,0.785874452986276,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,1.00416183829401,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,4.47274756525787,1.01304409331664,0.794455084879313,4.30254931123221,1.77334191099179,0,0,0.98667019366864,0,0,0,0.302714855289863,0,1.17160715916898,0.624320153660641,0,0.149448680551801,0,0,0,0.204154171254893,0.368502951935304,0.516628905878827,1.18800285728205,0.989067717114227,0,0,0,0,0,0,0.919463387397059,0.600952235626387,0.226864366320042,2.69084453533293,1.06778694409284,2.11931901159562,4.80145753735044,1.03052529238439,1.8034837803194,2.60563598864226,2.86919764810153,1.55899208257918,1.7670364197088,0.920498986422993,2.90962902273861,3.19508633264953,1.20902517873168,1.01736355386293,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.441175890929576,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.439001141634502,0,0,0.0925884451585296,2.28065813717227,0,0,0,0,0.433099343283221,1.38895653772983,0.761016608938393,0,0,0,0.468008530278475,0,0,0,0.283550194484773,0.806026704325635,0,0,0.985326475791887,0.968532774145487,0.414656231081544,1.44119953416961,1.13618190083742,0.126995788584338,0,0,0,0.822619941626588,3.60411669412701,0,1.23344192779897,0,1.39342743059805,1.68053230485111,0,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,1.29964888536674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0.271265023699736,0.831883446123229,1.60586089917446,1.10391690523754,0.35142424497814,0.601892199455438,6.82222512167955,2.0694614258501,0,0.553107505625109,0.868836144680828,2.54541504701563,0.686286847621712,0,0,0,0.909382714338778,3.32870879020994,0,1.98486246255021,1.2276957863045,1.96462066103151,1.53766979106841,5.62877973973374,4.02134802859019,0,2.00472601943452,2.48586415438378,1.56041596426237,1.03850885836724,3.02146983995894,0.604297247958111,0.802025881213139,0.276242966807689,0.229628896329213,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,1.02580050046556,1.64007322849853,5.20605431462885,1.33953315142039,0,0,0,0.650060246036521,0,0.580024309752732,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0.623224249527161,0.826424576804891,0.384380134730212,0,0.10115778085555,0.464845549297286,4.40737285562896,0.6970372701606,0.616067160352178,0,0,0,0,0.372158369359667,0,0.38126038784765,1.02359116524534,8.55877976067841,0,2.35484592059769,0.179872457583315,0,0.117812402345686,0.606547444719948,0,0,0,3.1682753652067,15.8475220135133,0.409499734223957,0.707027159768564,2.26016233240486,2.2054613741845,0,1.75380354101505,0.578775534266688,0,0,0.92947049429925,0,0.143411352204052,0.687743287091848,1.07001315444375,0.709522128141196,1.68886108238131,6.91519275215794,1.51789269506286,0.349934720244983,0.0962221127255121,0,0,1.7887322147588,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0.540911356951966,0,0,0,4.9812780952444,0,0,0,9.31103490476991,3.8605408508243,8.29333895667927,0,0.281338832821026,0,0,0,2.59022384726391,0.552567831062295,0,0.715880777515084,0,9.95326680517784,0,0,0,1.1837208676432,0,0,0.969332746095218,0.278304294485554,0,0,0,6.52499617891314,0,0,0.709163045303809,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0.278847488557207,1.92375646259493,0.113942055847001,0,0,0,28.3911032161408,16.3043716255315,59.1668601380685,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0.530745387020035,0.611030144933625,0,0,0,0,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0.821425535170343,0,0.207376382794494,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,2.27144668714639,0,0,0.0730893170861856,0,1.26085721434945,0,0.90392296312213,0,0,0.126621591911757,0.195551382734803,0,1.49417096317547,1.59847687665704,0,0,0.514784993585894,0,0,0.235694034616795,0,0,1.4279750469085,0.866851769704557,0,0.273810757783986,0,0,0,13.1262728597959,4.58320848023367,2.87149209830726,0.599037001496973,2.14613024068285,0.446342914883745,0.739018197353989,3.60299883542404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| ||
|short_description=p10@TIMP3 | |short_description=p10@TIMP3 | ||
}} | }} |
Latest revision as of 22:41, 19 September 2015
Short description: | p10@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 157bp_to_X80791_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.56e-12 | 76 |
preadipocyte | 2.40e-12 | 12 |
skin fibroblast | 1.29e-08 | 23 |
fat cell | 7.74e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 3.03e-13 | 66 |
omentum | 5.38e-09 | 6 |
peritoneum | 5.38e-09 | 6 |
abdominal cavity | 5.38e-09 | 6 |
visceral peritoneum | 5.38e-09 | 6 |
cavity lining | 1.18e-08 | 12 |
serous membrane | 1.18e-08 | 12 |
extraembryonic membrane | 1.25e-08 | 14 |
membranous layer | 1.25e-08 | 14 |
integument | 6.65e-08 | 46 |
integumental system | 6.65e-08 | 46 |
blood vessel layer | 1.48e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.70e-07 | 5 |
myotonic disease | 6.70e-07 | 5 |
muscle tissue disease | 6.70e-07 | 5 |
myopathy | 6.70e-07 | 5 |
muscular disease | 6.70e-07 | 5 |
myotonic dystrophy | 6.70e-07 | 5 |