FFCP PHASE1:Hg19::chr5:1201536..1201542,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=340024 | |EntrezGene=340024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27960 | |HGNC=27960 | ||
|TSSclassifier=strong | |||
|UniProt=Q695T7,E9PD72 | |UniProt=Q695T7,E9PD72 | ||
|association_with_transcript=-167bp_to_ENST00000304460,ENST00000515652,NM_001003841,uc003jbw.3_5end | |association_with_transcript=-167bp_to_ENST00000304460,ENST00000515652,NM_001003841,uc003jbw.3_5end | ||
|cluster_id=chr5:1201536..1201542,+ | |||
|coexpression_cluster_id=C318 | |coexpression_cluster_id=C318 | ||
|description=CAGE_peak_4_at_SLC6A19_5end | |description=CAGE_peak_4_at_SLC6A19_5end | ||
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|ontology_enrichment_celltype=CL:0000764!1.13e-17!2;CL:0000765!1.13e-17!2;CL:0000050!1.13e-17!2;CL:0000038!1.13e-17!2;CL:0000558!1.13e-17!2;CL:0000547!1.13e-17!2;CL:0000549!1.13e-17!2;CL:0000550!1.13e-17!2;CL:0000552!1.13e-17!2;CL:0000039!3.80e-11!7;CL:0000586!3.80e-11!7 | |ontology_enrichment_celltype=CL:0000764!1.13e-17!2;CL:0000765!1.13e-17!2;CL:0000050!1.13e-17!2;CL:0000038!1.13e-17!2;CL:0000558!1.13e-17!2;CL:0000547!1.13e-17!2;CL:0000549!1.13e-17!2;CL:0000550!1.13e-17!2;CL:0000552!1.13e-17!2;CL:0000039!3.80e-11!7;CL:0000586!3.80e-11!7 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.21e-40;1!UBERON:0004161;1.88e-15;11!UBERON:0009497;3.03e-13;13 | |ontology_enrichment_development_v019=UBERON:0006242;2.21e-40;1!UBERON:0004161;1.88e-15;11!UBERON:0009497;3.03e-13;13 | ||
|ontology_enrichment_disease=DOID:8552!5.79e-10!1;DOID:1799!8.17e-10!1;DOID:10165!8.17e-10!1;DOID:1798!8.17e-10!1;DOID:8692!2.12e-09!31;DOID:1240!2.28e-07!39 | |ontology_enrichment_disease=DOID:8552!5.79e-10!1;DOID:1799!8.17e-10!1;DOID:10165!8.17e-10!1;DOID:1798!8.17e-10!1;DOID:8692!2.12e-09!31;DOID:1240!2.28e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;1.83e-14;3!UBERON:0002108;3.22e-09;4!UBERON:0002423;2.28e-07;25!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002110;1.83e-14;3!UBERON:0002108;3.22e-09;4!UBERON:0002423;2.28e-07;25!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.60e-14,3;UBERON:0006242,1.60e-14,3;UBERON:0002108,3.49e-09,4;UBERON:0009497,2.20e-07,25;UBERON:0000015,2.20e-07,25;UBERON:0002423,2.20e-07,25;UBERON:0006235,2.20e-07,25;UBERON:0004161,2.20e-07,25 | |||
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|short_description=p4@SLC6A19 | |short_description=p4@SLC6A19 | ||
}} | }} |
Latest revision as of 22:48, 19 September 2015
Short description: | p4@SLC6A19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC6A19_5end |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | -167bp_to_ENST00000304460, ENST00000515652, NM_001003841, uc003jbw.3_5end |
EntrezGene: | SLC6A19 |
HGNC: | 27960 |
UniProt: | Q695T7E9PD72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.60e-14 | 3 |
gall bladder primordium | 1.60e-14 | 3 |
small intestine | 3.49e-09 | 4 |
epithelium of foregut-midgut junction | 2.20e-07 | 25 |
anatomical boundary | 2.20e-07 | 25 |
hepatobiliary system | 2.20e-07 | 25 |
foregut-midgut junction | 2.20e-07 | 25 |
septum transversum | 2.20e-07 | 25 |