FFCP PHASE1:Hg19::chr17:37934138..37934150,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:37934138..37934150,-
|short_description=p12@IKZF3
|description=CAGE_peak_12_at_IKZF3_5end
|association_with_transcript=327bp_to_uc010wel.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22806 | |EntrezGene=22806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13178 | |HGNC=13178 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=327bp_to_uc010wel.1_5end | |||
|cluster_id=chr17:37934138..37934150,- | |||
|coexpression_cluster_id=C1118 | |||
|description=CAGE_peak_12_at_IKZF3_5end | |||
|id=chr17:37934138..37934150,- | |||
|ontology_enrichment_celltype=CL:0000542!2.45e-46!53;CL:0000051!2.45e-46!53;CL:0000838!2.76e-44!52;CL:0000945!2.07e-42!24;CL:0000826!2.07e-42!24;CL:0000236!5.80e-27!14;CL:0002087!1.06e-18!119;CL:0000738!1.52e-16!140;CL:0002031!3.67e-14!124;CL:0000037!1.16e-11!172;CL:0000566!1.16e-11!172;CL:0000988!2.58e-11!182;CL:0002032!6.70e-11!165;CL:0000837!6.70e-11!165;CL:0000625!4.48e-10!11;CL:0000791!2.03e-09!18;CL:0000789!2.03e-09!18;CL:0002420!2.03e-09!18;CL:0002419!2.03e-09!18;CL:0000790!2.03e-09!18;CL:0000084!9.75e-08!25;CL:0000827!9.75e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.79e-90;24!CL:0000236;2.30e-65;13!CL:0000542;2.19e-31;53!CL:0000785;3.40e-10;1!CL:0000819;3.40e-10;1!CL:0000946;9.39e-10;1!CL:0000786;9.39e-10;1!CL:0002087;1.96e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.07e-90,24;CL:0000826,8.07e-90,24;CL:0000236,3.76e-73,14;CL:0000838,2.43e-45,52;CL:0000542,1.96e-44,53;CL:0000051,1.96e-44,53;CL:0002087,8.66e-19,115;CL:0000785,3.16e-18,2;CL:0000955,3.16e-18,2;CL:0000818,3.16e-18,2;CL:0000954,3.16e-18,2;CL:0000816,3.16e-18,2;CL:0002031,6.79e-18,120;CL:0000738,1.81e-15,136;CL:0002032,1.24e-12,161;CL:0000837,1.24e-12,161;CL:0000817,1.78e-12,3;CL:0000037,5.46e-12,168;CL:0000988,3.10e-11,177;CL:0000819,3.71e-10,1;CL:0000946,8.24e-10,1;CL:0000786,8.24e-10,1;CL:0000980,8.24e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.19e-31;53!CL:0000954;3.30e-18;2!UBERON:0004872;1.41e-11;7!UBERON:0001045;3.40e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.38e-14;10!DOID:0060073;3.40e-10;1!DOID:8675;3.40e-10;1!DOID:630;9.39e-10;1!DOID:0050177;9.39e-10;1!DOID:0050427;9.39e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.59e-14,10;DOID:0060073,3.71e-10,1;DOID:8675,3.71e-10,1;DOID:630,7.55e-10,1;DOID:0050177,7.55e-10,1;DOID:0050427,7.55e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.59e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.84e-12;3!UBERON:0002372;2.16e-10;1!UBERON:0001961;2.16e-10;1!UBERON:0001744;2.16e-10;1!UBERON:0001042;2.16e-10;1!UBERON:0001735;2.16e-10;1!UBERON:0001154;3.40e-10;1!UBERON:0001153;3.40e-10;1!UBERON:0009854;3.40e-10;1!UBERON:0004177;7.90e-08;5!UBERON:0005057;7.90e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.38e-12,3;UBERON:0004854,2.38e-12,3;UBERON:0009034,2.38e-12,3;UBERON:0002095,2.38e-12,3;UBERON:0004782,2.38e-12,3;UBERON:0003281,2.38e-12,3;UBERON:0009664,2.38e-12,3;UBERON:0002296,2.38e-12,3;UBERON:0005602,2.38e-12,3;UBERON:0001179,2.38e-12,3;UBERON:0006293,2.38e-12,3;UBERON:0002372,2.16e-10,1;UBERON:0001961,2.16e-10,1;UBERON:0001744,2.16e-10,1;UBERON:0001735,2.16e-10,1;UBERON:0001154,3.10e-10,1;UBERON:0001153,3.10e-10,1;UBERON:0001045,3.10e-10,1 | |||
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| ||
|short_description=p12@IKZF3 | |||
}} | }} |
Latest revision as of 22:52, 19 September 2015
Short description: | p12@IKZF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_IKZF3_5end |
Coexpression cluster: | C1118_Burkitt_lymphoma_diffuse_b_acute_CD19_plasma |
Association with transcript: | 327bp_to_uc010wel.1_5end |
EntrezGene: | IKZF3 |
HGNC: | 13178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.07e-90 | 24 |
pro-B cell | 8.07e-90 | 24 |
B cell | 3.76e-73 | 14 |
lymphoid lineage restricted progenitor cell | 2.43e-45 | 52 |
lymphocyte | 1.96e-44 | 53 |
common lymphoid progenitor | 1.96e-44 | 53 |
nongranular leukocyte | 8.66e-19 | 115 |
mature B cell | 3.16e-18 | 2 |
pre-B-II cell | 3.16e-18 | 2 |
transitional stage B cell | 3.16e-18 | 2 |
small pre-B-II cell | 3.16e-18 | 2 |
immature B cell | 3.16e-18 | 2 |
hematopoietic lineage restricted progenitor cell | 6.79e-18 | 120 |
leukocyte | 1.81e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.24e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-12 | 161 |
precursor B cell | 1.78e-12 | 3 |
hematopoietic stem cell | 5.46e-12 | 168 |
hematopoietic cell | 3.10e-11 | 177 |
B-1 B cell | 3.71e-10 | 1 |
antibody secreting cell | 8.24e-10 | 1 |
plasma cell | 8.24e-10 | 1 |
plasmablast | 8.24e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.38e-12 | 3 |
gastrointestinal system mesentery | 2.38e-12 | 3 |
stomach region | 2.38e-12 | 3 |
mesentery | 2.38e-12 | 3 |
gastrointestinal system serosa | 2.38e-12 | 3 |
mesentery of stomach | 2.38e-12 | 3 |
gut mesentery | 2.38e-12 | 3 |
dorsal mesentery | 2.38e-12 | 3 |
dorsal mesogastrium | 2.38e-12 | 3 |
peritoneal cavity | 2.38e-12 | 3 |
spleen primordium | 2.38e-12 | 3 |
tonsil | 2.16e-10 | 1 |
mucosa-associated lymphoid tissue | 2.16e-10 | 1 |
lymphoid tissue | 2.16e-10 | 1 |
tonsillar ring | 2.16e-10 | 1 |
vermiform appendix | 3.10e-10 | 1 |
caecum | 3.10e-10 | 1 |
midgut | 3.10e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.59e-14 | 10 |
lymphatic system cancer | 3.71e-10 | 1 |
lymphosarcoma | 3.71e-10 | 1 |
genetic disease | 7.55e-10 | 1 |
monogenic disease | 7.55e-10 | 1 |
xeroderma pigmentosum | 7.55e-10 | 1 |