FFCP PHASE1:Hg19::chr22:33257722..33257777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7078 | |EntrezGene=7078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11822 | |HGNC=11822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=142bp_to_AF035289_5end | |association_with_transcript=142bp_to_AF035289_5end | ||
|cluster_id=chr22:33257722..33257777,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_7_at_TIMP3_5end | |description=CAGE_peak_7_at_TIMP3_5end | ||
|id=chr22:33257722..33257777,+ | |id=chr22:33257722..33257777,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.03e-13!180;CL:0000057!2.90e-09!75;CL:0002334!2.79e-08!12;CL:0000192!2.30e-07!42;CL:0000514!2.30e-07!42;CL:0000359!5.79e-07!32 | |ontology_enrichment_celltype=CL:0000055!3.03e-13!180;CL:0000057!2.90e-09!75;CL:0002334!2.79e-08!12;CL:0000192!2.30e-07!42;CL:0000514!2.30e-07!42;CL:0000359!5.79e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.69e-12;12!CL:0000349;1.56e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-13,76;CL:0002334,1.28e-11,12;CL:0000349,1.29e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!2.96e-11!57;UBERON:0000475!7.34e-11!365;UBERON:0007023!2.22e-09!115;UBERON:0002385!6.85e-08!63;UBERON:0001015!6.85e-08!63;UBERON:0000383!6.85e-08!63;UBERON:0004290!1.30e-07!70;UBERON:0001134!1.78e-07!61;UBERON:0002036!1.78e-07!61;UBERON:0003082!1.78e-07!61;UBERON:0004872!2.01e-07!84;UBERON:0000486!8.00e-07!82 | |ontology_enrichment_uberon=UBERON:0004923!2.96e-11!57;UBERON:0000475!7.34e-11!365;UBERON:0007023!2.22e-09!115;UBERON:0002385!6.85e-08!63;UBERON:0001015!6.85e-08!63;UBERON:0000383!6.85e-08!63;UBERON:0004290!1.30e-07!70;UBERON:0001134!1.78e-07!61;UBERON:0002036!1.78e-07!61;UBERON:0003082!1.78e-07!61;UBERON:0004872!2.01e-07!84;UBERON:0000486!8.00e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.30e-09;9!UBERON:0000042;6.30e-09;9!UBERON:0003688;1.77e-08;6!UBERON:0002358;1.77e-08;6!UBERON:0003684;1.77e-08;6!UBERON:0001178;1.77e-08;6!UBERON:0005631;3.37e-08;10!UBERON:0000158;3.37e-08;10!UBERON:0000478;1.35e-07;24!UBERON:0000948;7.09e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,2.17e-11,66;UBERON:0005631,1.99e-10,14;UBERON:0000158,1.99e-10,14;UBERON:0003688,1.88e-08,6;UBERON:0002358,1.88e-08,6;UBERON:0003684,1.88e-08,6;UBERON:0001178,1.88e-08,6;UBERON:0000478,1.17e-07,24;UBERON:0003124,1.65e-07,7;UBERON:0004457,1.79e-07,12;UBERON:0000042,1.79e-07,12;UBERON:0004872,2.45e-07,83;UBERON:0000948,3.99e-07,24;UBERON:0005498,3.99e-07,24;UBERON:0004140,3.99e-07,24;UBERON:0009881,3.99e-07,24;UBERON:0004141,3.99e-07,24;UBERON:0003084,3.99e-07,24;UBERON:0007005,3.99e-07,24;UBERON:0004139,3.99e-07,24;UBERON:0004291,3.99e-07,24;UBERON:0007100,6.20e-07,27 | |||
|phase1_expression=2.54349730978779,2.99740733447376,3.10099689011137,15.0109947529696,4.46961094427288,11.3404008133048,0,0,0.522371256399677,0.245733936501509,0.697801167972428,3.49506195408276,1.31883489114227,0,0.331397375727916,1.34465029290355,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0.626909442956176,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,4.87613732627923,0,0.255725123687061,1.0843174571537,1.00267582127178,1.01392563272577,3.1811437882044,10.705967146658,0.0945348171640679,0.665188192387692,0.175669571386252,0.72038491523742,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,7.9515512271251,1.39293562831038,0.794455084879313,6.02356903572509,1.06400514659507,1.12135520028461,2.1349799145941,1.48000529050296,0,0,0,0.302714855289863,1.15235184896,1.40592859100278,0.936480230490962,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.491337269247072,0.619954687054593,0,1.97813543422845,0,0,0,0,0,0,1.22595118319608,0.300476117813194,0.113432183160021,1.61450672119976,1.2813443329114,5.72216133130817,8.40255069036326,1.44273540933814,4.12224864073007,2.60563598864226,4.72573730275545,1.16924406193438,2.01947019395292,1.28869858099219,3.71785930683267,3.90510551768276,1.10827308050404,0.847802961552438,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,2.76269842704961,0.928735856063958,0,0,0,0,0,0,0,0,0.196221465125346,0,0.738155454624648,4.20725321410337,0.4115740113314,0,0,0,0.590789906681404,0,0.614942192715568,0,0.439001141634502,0,0,0.185176890317059,0.977424915930974,1.03993478527958,0,0,0.234817388471643,0.433099343283221,0.925971025153221,0.951270761172991,0,0,0,0,0,0.93733833986777,0,0,0,0.581267877027924,0,0.492663237895943,0.264145302039678,0.414656231081544,1.00883967391873,0.50496973370552,0.126995788584338,0.381988425558278,0,5.13217338068116,1.95372236136315,4.20480280981484,0,0.224262168690721,0,0.80672114403045,1.80980402060889,0,2.535908257668,0,0,0.257207374262142,0,0.799266537048298,0.714889968290738,0,0,0,0.355391948742546,0,0,0,1.69954085009497,0,0,4.21667878966063,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,1.24782516918484,2.3195768543631,1.57702415033935,1.05427273493442,3.31040709700491,4.5481500811197,3.10419213877515,0,1.65932251687533,1.12948698808508,0.587403472388222,1.37257369524342,0,0,0,0.303127571446259,4.99306318531491,3.32629322662648,5.45837177201309,2.14846762603287,5.89386198309454,3.71603532841533,9.72243773226737,7.72098821489316,7.42090332224955,4.62629081407967,6.21466038595945,0.657017248110473,1.03850885836724,2.20799719073923,0.120859449591622,1.40354529212299,0.184161977871793,0.68888668898764,0.182091168006717,0.524497659837696,0,0.15403067420883,0,0,0,0,0.340187410553031,0.431831832204279,3.08454505380579,0,0,0,0,0,0,0,0.769350375349168,1.31205858279882,3.25378394664303,1.33953315142039,0,0,0,1.30012049207304,0,0.48335359146061,0.308097234229289,0.15350367472613,0.137836572484531,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0.384380134730212,0.255225424989168,0.4046311234222,3.71876439437829,10.0739950985805,1.3940745403212,0.308033580176089,1.59691809095107,0,0.74129687641568,0.143124886741991,1.86079184679834,0.632758849437452,0.38126038784765,2.303080121802,17.9734374974247,0,0.78494864019923,0.539617372749944,0.54907405947211,0.117812402345686,1.41527737101321,3.17020642346017,1.26377536871694,0,3.65570234446927,25.3560352216213,0.136499911407986,0.848432591722276,4.52032466480971,0.551365343546124,0,4.38450885253763,0.578775534266688,4.59126326432643,1.01455188481352,0.6196469961995,0.281695602532241,0.143411352204052,0.392996164052485,3.5667105148125,0,2.9555068941673,3.62224382255892,0,0.349934720244983,0.288666338176536,0,0,0.847294206991012,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,2.3441308683503,0,0,0,21.0095146569167,3.8605408508243,30.1017488057247,0,0.984685914873589,0,0,0.211125408127993,2.39097585901284,0.552567831062295,0,0.715880777515084,0,22.3948503116501,0,0,0,1.28236427328014,0,0,0,0.185536196323703,0,0,0,3.62499787717397,0.1137934482855,0,0.472775363535873,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.658156191461918,0,0.697118721393016,1.69290568708354,0.683652335082007,0,0,0.434589487688032,56.4632052725498,13.5564438234756,129.527450572528,0,0,0,0,0,0,0,0.158936578980379,0,0,0.282706142867882,0,0,0.884575645033392,0.61103014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| ||
|short_description=p7@TIMP3 | |short_description=p7@TIMP3 | ||
}} | }} |
Latest revision as of 22:57, 19 September 2015
Short description: | p7@TIMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TIMP3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 142bp_to_AF035289_5end |
EntrezGene: | TIMP3 |
HGNC: | 11822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-13 | 76 |
preadipocyte | 1.28e-11 | 12 |
extraembryonic cell | 1.29e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 2.17e-11 | 66 |
extraembryonic membrane | 1.99e-10 | 14 |
membranous layer | 1.99e-10 | 14 |
omentum | 1.88e-08 | 6 |
peritoneum | 1.88e-08 | 6 |
abdominal cavity | 1.88e-08 | 6 |
visceral peritoneum | 1.88e-08 | 6 |
extraembryonic structure | 1.17e-07 | 24 |
chorion | 1.65e-07 | 7 |
cavity lining | 1.79e-07 | 12 |
serous membrane | 1.79e-07 | 12 |
splanchnic layer of lateral plate mesoderm | 2.45e-07 | 83 |
heart | 3.99e-07 | 24 |
primitive heart tube | 3.99e-07 | 24 |
primary heart field | 3.99e-07 | 24 |
anterior lateral plate mesoderm | 3.99e-07 | 24 |
heart tube | 3.99e-07 | 24 |
heart primordium | 3.99e-07 | 24 |
cardiac mesoderm | 3.99e-07 | 24 |
cardiogenic plate | 3.99e-07 | 24 |
heart rudiment | 3.99e-07 | 24 |
primary circulatory organ | 6.20e-07 | 27 |