FFCP PHASE1:Hg19::chrX:151903207..151903234,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158511 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24294 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PB30 | |||
|association_with_transcript=0bp_to_ENST00000370287,NM_001102576,NM_153478,uc004fgd.2,uc004fge.2,uc004fgf.2_5end | |||
|cluster_id=chrX:151903207..151903234,+ | |||
|coexpression_cluster_id=C2956 | |||
|description=CAGE_peak_1_at_CSAG1_5end | |||
|id=chrX:151903207..151903234,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.24e-21;29 | |||
|ontology_enrichment_disease=DOID:14566!6.05e-22!239;DOID:162!1.97e-21!235;DOID:0050687!1.81e-17!143;DOID:305!6.92e-12!106;DOID:0050686!2.05e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1115;3.22e-10;20!DOID:0050615;7.26e-10;16!DOID:1324;2.84e-08;15!DOID:0050687;6.55e-08;143!DOID:201;1.44e-07;6!DOID:0060100;1.44e-07;6!DOID:5409;8.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.15e-32,235;DOID:14566,1.10e-31,239;DOID:0050687,5.26e-26,143;DOID:305,1.21e-17,106;DOID:0050686,7.76e-15,137;DOID:1115,3.11e-10,20;DOID:0050615,7.08e-10,16;DOID:1324,2.71e-08,15;DOID:201,1.51e-07,6;DOID:0060100,1.51e-07,6;DOID:5409,8.43e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000955!8.03e-16!69;UBERON:0006238!8.03e-16!69;UBERON:0002020!6.16e-15!34;UBERON:0003528!6.16e-15!34;UBERON:0001893!8.34e-15!34;UBERON:0001017!1.51e-14!82;UBERON:0001737!2.38e-14!9;UBERON:0002791!4.37e-14!33;UBERON:0001049!9.37e-14!57;UBERON:0005068!9.37e-14!57;UBERON:0006241!9.37e-14!57;UBERON:0007135!9.37e-14!57;UBERON:0000073!1.46e-13!94;UBERON:0001016!1.46e-13!94;UBERON:0005743!2.14e-13!86;UBERON:0001869!3.13e-13!32;UBERON:0002780!2.26e-12!41;UBERON:0001890!2.26e-12!41;UBERON:0006240!2.26e-12!41;UBERON:0002616!5.78e-12!59;UBERON:0003080!6.24e-12!42;UBERON:0002619!1.14e-10!22;UBERON:0001950!1.88e-10!20;UBERON:0000956!2.55e-10!25;UBERON:0000203!2.55e-10!25;UBERON:0008947!3.41e-09!38;UBERON:0003258!3.41e-09!38;UBERON:0003075!6.14e-08!86;UBERON:0007284!6.14e-08!86;UBERON:0002346!2.99e-07!90;UBERON:0003056!3.29e-07!61;UBERON:0000072!9.45e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.43e-24;9!UBERON:0001557;2.43e-24;9!UBERON:0000072;4.40e-14;37!UBERON:0000065;2.98e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.08e-24,9;UBERON:0008947,3.58e-15,38;UBERON:0003258,3.58e-15,38;UBERON:0000072,1.66e-11,47;UBERON:0001557,1.33e-10,19;UBERON:0000065,1.62e-09,54;UBERON:0001041,3.72e-07,87;UBERON:0001004,7.63e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0.229240217243854,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7771344043031,10.4522507848423,12.5325735539411,13.7867465915492,13.0727666455444,9.72809538355496,14.6966125894579,12.7543952331475,11.9271618653381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65723935373318,1.02943027143257,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6946990489456,22.4425839783999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,3.98063385144732,3.94605796728386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.3115282072792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06103206853459,0,0,0,0,3.61928026063815,0,0,0,0,0,0,0,15.4906304145695,0,0,0,0,0,0.281338832821026,0.333926115068718,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,3.33410970433911,0,0.185536196323703,0,0,0,0,0,11.6956679134672,0,6.20538071834636,5.24888304089858,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0.438770794307945,19.3910465063802,0,0,29.9667606877613,20.2896235861493,0.807818799687949,7.71396340646257,0,0,0,0,0,0,11.5053786914762,15.6850027454192,13.0900837841157,17.457343410625,0,21.7328006463868,0,0,19.4749775767882,0,0,0,0,0,0,0.202203398942031,0,0,0,17.8054803228202,0,0,0,0,0,0,0,0,0,0,0,0,42.7117992880467,0,0,0,0,0,0,0,0,0,0,0,11.1003958963868,18.480458888378,0.189932387867636,0,16.9936698933251,0,0.19980960958213,0,0,9.60931988027002,0,0,0,0.135904206073614,0.313808538937,0,12.7138259556668,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.0949314138613,23.1158196539592,0,0.272406812223151,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,27.6481503309107,0,0,0.129282956361551,0.39669780522807,1.19760786519031,13.3914854240168,0,0,0,0,31.2226378398752,0,0,0,0,0,0,3.45519011750515,0,0.244052529803926,0.1251909307065,0,0,0.248385611765534,3.45871587340577,27.1207485277771,3.1846314683746,21.1244346823276,0.941063278792687,0,3.4781046866598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,2.31522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,16.9583307040066,0,0,0,8.09410404405834,3.97261167496785,12.5192046171252,0,0,0,0,0.471797825567689,0,0,0,0,0,0,0,36.8262544211316,0,0,0.321146125482298,1.41696576325585,0.478901577171454,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,3.05105676373734,0,0,0,17.9517511146133,0,14.6667748909597,10.153858885626,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0.135939465953663,0.328863867814245,0,0,0,0.157115589916002,0,0,13.1715830643359,0,0,0,9.76427973092252,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,11.8920090777569,0.11294608203896,8.79524133963433,10.8693247368005,0,0,0.940634592723046,0,0.235676547101626,0,0.297046400327086,0,0,0,0,19.688407717211,0.178553938605658,3.52894871715692,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0.655593431782173,9.50238757585777,0,0,0,0,0.833565680400634,0.535928260312357,0,0.103432995861895,0,0,0,0,4.70953822838576,0,0,0,0,0,0.143444410785353,0,0.732629417498771,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@CSAG1 | |||
}} |
Latest revision as of 22:58, 19 September 2015
Short description: | p1@CSAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSAG1_5end |
Coexpression cluster: | C2956_endometrial_nonsmall_cholangiocellular_liposarcoma_lymphangiectasia_medulloblastoma_melanoma |
Association with transcript: | 0bp_to_ENST00000370287, NM_001102576, NM_153478, uc004fgd.2, uc004fge.2, uc004fgf.2_5end |
EntrezGene: | CSAG1 |
HGNC: | 24294 |
UniProt: | Q6PB30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 2.08e-24 | 9 |
respiratory primordium | 3.58e-15 | 38 |
endoderm of foregut | 3.58e-15 | 38 |
segment of respiratory tract | 1.66e-11 | 47 |
upper respiratory tract | 1.33e-10 | 19 |
respiratory tract | 1.62e-09 | 54 |
foregut | 3.72e-07 | 87 |
respiratory system | 7.63e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.15e-32 | 235 |
disease of cellular proliferation | 1.10e-31 | 239 |
cell type cancer | 5.26e-26 | 143 |
carcinoma | 1.21e-17 | 106 |
organ system cancer | 7.76e-15 | 137 |
sarcoma | 3.11e-10 | 20 |
respiratory system cancer | 7.08e-10 | 16 |
lung cancer | 2.71e-08 | 15 |
connective tissue cancer | 1.51e-07 | 6 |
musculoskeletal system cancer | 1.51e-07 | 6 |
lung small cell carcinoma | 8.43e-07 | 4 |