FFCP PHASE1:Hg19::chrX:151903235..151903247,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158511 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24294 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PB30 | |||
|association_with_transcript=7bp_to_ENST00000370287,NM_001102576,NM_153478,uc004fgd.2,uc004fge.2,uc004fgf.2_5end | |||
|cluster_id=chrX:151903235..151903247,+ | |||
|coexpression_cluster_id=C2956 | |||
|description=CAGE_peak_3_at_CSAG1_5end | |||
|id=chrX:151903235..151903247,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000054;5.98e-07;2!CL:0000137;5.98e-07;2!CL:0000092;5.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.71e-07,2;CL:0000137,5.71e-07,2;CL:0000092,5.71e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.13e-21;29 | |||
|ontology_enrichment_disease=DOID:162!3.10e-22!235;DOID:14566!3.32e-22!239;DOID:0050687!5.99e-20!143;DOID:305!1.86e-13!106;DOID:0050686!1.23e-08!137;DOID:1115!9.30e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:1115;1.63e-09;20!DOID:0050615;1.06e-08;16!DOID:0050687;6.18e-08;143!DOID:5409;2.55e-07;4!DOID:1325;3.37e-07;7!DOID:3904;3.37e-07;7!DOID:1324;4.28e-07;15!DOID:200;5.98e-07;2!DOID:4305;5.98e-07;2!DOID:305;7.04e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.64e-31,235;DOID:14566,1.37e-30,239;DOID:0050687,3.81e-26,143;DOID:305,2.65e-19,106;DOID:0050686,6.06e-15,137;DOID:1115,1.46e-09,20;DOID:0050615,9.75e-09,16;DOID:5409,2.41e-07,4;DOID:1325,3.07e-07,7;DOID:3904,3.07e-07,7;DOID:1324,4.02e-07,15;DOID:200,5.71e-07,2;DOID:4305,5.71e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.24e-17!9;UBERON:0001017!7.29e-12!82;UBERON:0005743!5.98e-11!86;UBERON:0000073!8.54e-11!94;UBERON:0001016!8.54e-11!94;UBERON:0001049!2.85e-10!57;UBERON:0005068!2.85e-10!57;UBERON:0006241!2.85e-10!57;UBERON:0007135!2.85e-10!57;UBERON:0000955!3.37e-10!69;UBERON:0006238!3.37e-10!69;UBERON:0002020!6.53e-09!34;UBERON:0003528!6.53e-09!34;UBERON:0001557!2.05e-08!19;UBERON:0008947!3.16e-08!38;UBERON:0003258!3.16e-08!38;UBERON:0002791!4.74e-08!33;UBERON:0002616!7.74e-08!59;UBERON:0002780!9.98e-08!41;UBERON:0001890!9.98e-08!41;UBERON:0006240!9.98e-08!41;UBERON:0001893!1.02e-07!34;UBERON:0003080!1.87e-07!42;UBERON:0001950!5.10e-07!20;UBERON:0000072!5.80e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.66e-28;9!UBERON:0001557;8.66e-28;9!UBERON:0000072;1.35e-14;37!UBERON:0000065;8.74e-10;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.15e-27,9;UBERON:0008947,2.01e-15,38;UBERON:0003258,2.01e-15,38;UBERON:0001557,3.68e-12,19;UBERON:0000072,8.97e-12,47;UBERON:0000065,8.63e-10,54;UBERON:0001041,1.48e-07,87;UBERON:0001004,3.49e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25904480143438,5.39471008249925,4.33819853790268,6.83822630940842,5.66486554640256,3.08451804844426,6.33707148352773,4.51309369788296,5.00171304030308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54541504701563,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.6002655799225,6.1882124940441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65375590096488,2.19225442626881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,1.67043704337145,0,0,0,0,0,0,0,3.34330152832435,0,0,0,0,0,0.281338832821026,0.445234820091624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,5.84783395673362,0,3.79217710565611,2.33283690706603,0,0,0.241192877250816,0,0.110579259931225,0,0,8.8240155450382,0,0,8.77353830021909,4.15015027898508,0.179515288819544,3.80265801727028,0,0,0,0,0,0,2.70714792740617,4.50943828930801,5.70593395717865,2.46679852541441,0,8.01792645206503,0,0,5.40971599355228,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,3.32629852184552,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,15.3928887044584,0,0,0,0,0,0,0,0,0,0,0,3.70013196546227,4.76915068087175,0,0,4.24841747333129,0,0,0,0,3.77508995296322,0,0,0,0,0.104602846312333,0,4.91216002832582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16948096572415,5.50376658427599,0,0,0,0.137539436597234,0.415440338029185,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.29159150465031,0,0,0.129282956361551,0.26446520348538,0,6.34333520085005,0,0,0,0,8.10207690781571,0,0,0,0,0,0,1.57054096250234,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,2.07522952404346,12.1230995723243,0.909894705249887,11.9895440088886,0.235265819698172,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,8.8478247151339,0,0,0,1.54993481694734,0.567515953566836,8.10066181108099,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,10.4074197277111,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,1.1441462864015,0,0,0,7.86649767943728,0,7.33338744547983,3.11166643269184,0,0,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,3.67076905071656,0,0,0,6.85824409671939,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44868263254949,0,3.62803705259916,2.8682940277668,0,0,1.41095188908457,0,0,0.392616934229891,0.297046400327086,0,0,0,0,2.89829352182294,0,3.17605384544123,0,0,0,0.143339583151451,0,0.271965960763659,0,0,0,0,0,0,0.546327859818478,4.18105053337742,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.20686599172379,0,0,0.0645889098360061,0,2.80329656451534,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CSAG1 | |||
}} |
Latest revision as of 22:59, 19 September 2015
Short description: | p3@CSAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSAG1_5end |
Coexpression cluster: | C2956_endometrial_nonsmall_cholangiocellular_liposarcoma_lymphangiectasia_medulloblastoma_melanoma |
Association with transcript: | 7bp_to_ENST00000370287, NM_001102576, NM_153478, uc004fgd.2, uc004fge.2, uc004fgf.2_5end |
EntrezGene: | CSAG1 |
HGNC: | 24294 |
UniProt: | Q6PB30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.71e-07 | 2 |
osteocyte | 5.71e-07 | 2 |
osteoclast | 5.71e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.15e-27 | 9 |
respiratory primordium | 2.01e-15 | 38 |
endoderm of foregut | 2.01e-15 | 38 |
upper respiratory tract | 3.68e-12 | 19 |
segment of respiratory tract | 8.97e-12 | 47 |
respiratory tract | 8.63e-10 | 54 |
foregut | 1.48e-07 | 87 |
respiratory system | 3.49e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.64e-31 | 235 |
disease of cellular proliferation | 1.37e-30 | 239 |
cell type cancer | 3.81e-26 | 143 |
carcinoma | 2.65e-19 | 106 |
organ system cancer | 6.06e-15 | 137 |
sarcoma | 1.46e-09 | 20 |
respiratory system cancer | 9.75e-09 | 16 |
lung small cell carcinoma | 2.41e-07 | 4 |
bronchus cancer | 3.07e-07 | 7 |
bronchogenic carcinoma | 3.07e-07 | 7 |
lung cancer | 4.02e-07 | 15 |
giant cell tumor | 5.71e-07 | 2 |
bone giant cell tumor | 5.71e-07 | 2 |