FFCP PHASE1:Hg19::chr5:121413944..121413965,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4015 | |EntrezGene=4015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6664 | |HGNC=6664 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQF8 | |UniProt=B4DQF8 | ||
|association_with_transcript=0bp_to_ENST00000543620_5end | |association_with_transcript=0bp_to_ENST00000543620_5end | ||
|cluster_id=chr5:121413944..121413965,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_1_at_LOX_5end | |description=CAGE_peak_1_at_LOX_5end | ||
|id=chr5:121413944..121413965,- | |id=chr5:121413944..121413965,- | ||
|ontology_enrichment_celltype=CL:0000055!2.36e-43!180;CL:0000057!3.01e-25!75;CL:0000222!4.63e-20!119;CL:0000680!1.53e-18!57;CL:0000056!1.53e-18!57;CL:0000355!1.53e-18!57;CL:0000187!1.79e-17!54;CL:0000183!1.42e-16!59;CL:0000393!1.48e-15!60;CL:0000211!1.48e-15!60;CL:0000192!2.14e-15!42;CL:0000514!2.14e-15!42;CL:0000359!1.20e-12!32;CL:0000220!3.85e-12!246;CL:0002321!1.53e-11!248;CL:0002620!6.29e-11!23;CL:0002334!4.84e-08!12;CL:0000144!4.73e-07!625;CL:0000136!5.57e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.36e-43!180;CL:0000057!3.01e-25!75;CL:0000222!4.63e-20!119;CL:0000680!1.53e-18!57;CL:0000056!1.53e-18!57;CL:0000355!1.53e-18!57;CL:0000187!1.79e-17!54;CL:0000183!1.42e-16!59;CL:0000393!1.48e-15!60;CL:0000211!1.48e-15!60;CL:0000192!2.14e-15!42;CL:0000514!2.14e-15!42;CL:0000359!1.20e-12!32;CL:0000220!3.85e-12!246;CL:0002321!1.53e-11!248;CL:0002620!6.29e-11!23;CL:0002334!4.84e-08!12;CL:0000144!4.73e-07!625;CL:0000136!5.57e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.64e-12;32!CL:0000192;7.56e-12;43!CL:0002620;2.64e-11;23!CL:0000057;7.68e-11;73!CL:0000187;2.26e-10;55!CL:0000393;2.25e-08;61!CL:0000211;2.25e-08;61!CL:0000134;2.31e-08;55!CL:0002334;2.70e-08;12!CL:0002320;2.74e-08;188!CL:0000048;9.46e-08;58!CL:0000723;1.03e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.58e-27,76;CL:0000222,5.57e-21,121;CL:0000680,1.56e-19,58;CL:0000056,1.56e-19,58;CL:0000355,1.56e-19,58;CL:0000187,2.03e-18,55;CL:0000192,2.97e-16,43;CL:0000514,2.97e-16,43;CL:0000393,9.47e-16,61;CL:0000211,9.47e-16,61;CL:0000359,4.42e-13,32;CL:0002620,2.72e-11,23;CL:0002321,6.75e-11,250;CL:0002334,2.70e-08,12;CL:0000048,2.56e-07,427;CL:0000136,3.41e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;7.56e-12;43!CL:0000355;1.44e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!7.47e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.96e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.63e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.27e-21!83;UBERON:0002329!1.27e-21!83;UBERON:0003077!1.27e-21!83;UBERON:0003059!1.27e-21!83;UBERON:0007282!1.27e-21!83;UBERON:0009618!1.27e-21!83;UBERON:0007285!1.27e-21!83;UBERON:0004290!1.68e-20!70;UBERON:0005256!9.87e-19!143;UBERON:0001134!1.03e-18!61;UBERON:0002036!1.03e-18!61;UBERON:0003082!1.03e-18!61;UBERON:0002385!2.60e-18!63;UBERON:0001015!2.60e-18!63;UBERON:0000383!2.60e-18!63;UBERON:0000486!7.08e-18!82;UBERON:0004872!1.50e-17!84;UBERON:0002049!7.52e-17!79;UBERON:0007798!7.52e-17!79;UBERON:0000490!9.68e-15!138;UBERON:0003914!1.88e-14!118;UBERON:0000055!2.80e-14!69;UBERON:0002100!5.52e-14!216;UBERON:0001981!6.17e-14!60;UBERON:0007500!6.17e-14!60;UBERON:0004537!6.17e-14!60;UBERON:0006965!6.17e-14!60;UBERON:0000475!3.44e-13!365;UBERON:0001637!5.29e-13!42;UBERON:0003509!5.29e-13!42;UBERON:0004572!5.29e-13!42;UBERON:0004535!2.28e-12!110;UBERON:0001009!2.63e-12!113;UBERON:0000468!1.58e-11!659;UBERON:0004573!1.62e-11!33;UBERON:0004571!1.62e-11!33;UBERON:0003104!6.65e-11!238;UBERON:0009142!6.65e-11!238;UBERON:0000481!1.41e-10!347;UBERON:0000119!9.30e-10!312;UBERON:0000483!2.38e-09!309;UBERON:0003102!2.92e-09!95;UBERON:0000477!2.07e-08!286;UBERON:0000467!2.13e-08!625;UBERON:0000480!3.42e-08!626;UBERON:0002199!3.73e-08!45;UBERON:0002416!3.73e-08!45;UBERON:0000948!2.98e-07!24;UBERON:0005498!2.98e-07!24;UBERON:0004140!2.98e-07!24;UBERON:0009881!2.98e-07!24;UBERON:0004141!2.98e-07!24;UBERON:0003084!2.98e-07!24;UBERON:0007005!2.98e-07!24;UBERON:0004139!2.98e-07!24;UBERON:0004291!2.98e-07!24;UBERON:0000947!6.69e-07!21;UBERON:0010191!6.69e-07!21;UBERON:0007100!6.82e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.89e-11;33!UBERON:0004571;9.89e-11;33!UBERON:0001637;1.25e-09;42!UBERON:0003509;1.25e-09;42!UBERON:0004572;1.25e-09;42!UBERON:0002384;6.99e-09;198!UBERON:0002385;5.77e-08;31!UBERON:0001015;5.77e-08;31!UBERON:0000383;5.77e-08;31!UBERON:0007500;7.86e-08;56!UBERON:0001981;7.86e-08;56!UBERON:0004537;7.86e-08;56!UBERON:0002049;3.26e-07;75!UBERON:0007798;3.26e-07;75!UBERON:0000947;4.20e-07;21!UBERON:0010191;4.20e-07;21!UBERON:0000055;4.28e-07;65!UBERON:0000948;7.34e-07;22 | |||
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|phase1_expression=941.094004621483,680.839665973326,823.032765516376,1130.82827139037,769.220043509362,1451.57130410301,210.238898879698,154.139649116147,60.8562513705624,92.8874279975703,41.1702689103732,4.58726881473362,11.605747042052,73.2696809523476,93.1226625795443,147.911532219391,152.481715590066,146.062018077475,166.873017186353,120.412394799099,92.8203145161351,230.389220286395,63.5443891430946,35.9979737941685,58.8794979699625,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,1.17440175733939,21.6058209327432,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,277.939827597916,147.5541891348,613.868159410789,700.830516473674,486.799111227449,689.614276772482,46.9218708760149,510.966613817768,16.8271974552041,47.4500910569887,43.5660537037905,5.95954793514592,0.364295288292542,1.11235332835329,0,0,0.26591592103773,0,0,0,13.3170812935692,36.9900875895634,14.9270415691266,24.8735494446564,36.4964509502618,13.2056660131232,11.9127130925982,42.1219317446006,35.576626268671,91.0440066719903,30.6150281002952,33.4519726516146,46.3717909341522,9.19157700864672,15.3926970097534,9.37647146982838,6.06229306090659,11.3737595288155,24.5306619945413,8.54339093611316,13.5569290508501,0,0,6.10531672999548,1386.05477327824,534.887281271185,1894.1133315331,3202.24403403976,501.855760810675,225.392395257207,353.339175865324,255.794247708595,104.255696858922,63.8528585610321,47.7308757091299,79.7653643688788,120.9969441408,48.0358935259283,145.154435726099,112.382948844257,158.266152704357,61.1833737934015,115.901028167582,101.545933245726,40.218371737214,20.2676623564417,45.1533663738095,624.88950293036,733.146445310921,189.313563283109,280.979693450149,14.3085696860956,16.5156446230993,106.115556230442,439.416598501719,464.635498431314,955.063340469236,121.939596897023,1838.92315544652,775.640436189037,775.246894441677,1830.55568611485,452.503655885985,1790.60175331712,835.292451216175,2137.04591883891,727.269806523187,1579.73055921967,834.892580685655,281.264138864733,2006.86922649642,423.360316752544,315.552262289817,0,0.818238361772504,0.573609190778008,0,0,3.71820617182459,4.25010325563019,5.55105871926382,0,46.9348596989448,74.6159488303747,45.5845240463186,525.200126604168,707.441892036194,4.02243120135469,4.72037132218685,6.26628677697053,4.74264082749294,5.01122721412534,4.50814176311084,5.12358971008625,4.70931516300831,6.15595451114225,1.4763109092493,117.803089994894,132.526831648711,257.265244924698,0,0,5.90789906681404,0,1.72183813960359,245.51353653719,0.98775256867763,0,0,2.03694579348765,31.2775973097912,36.3977174847852,67.8357307518784,21.9108465402895,533.03547183063,14.7253776716295,18.5194205030644,24.7330397904978,0,0,0,0,0,4.68669169933885,2.85569617938061,3.1190521393325,16.2996511319184,3.19697332365358,9.58456697913028,0,0.088048434013226,1.65862492432618,1.58531948758658,0.75745460055828,0.761974731506028,1.52795370223311,0,22.2394179829517,7.71206195274926,0.300343057843917,0,44.4039094007628,131.659940787651,45.9831052097357,698.325808523515,286.125156681506,57.480587173808,223.122079814706,137.289816723003,32.9225439055542,43.9732309272163,47.4231478648657,664.56171452307,163.871724828216,86.4402353619807,61.5641388315159,557.965359525797,48.3090642489392,398.804295849832,349.484916898718,785.88768368215,0,0,0,459.840097688347,183.779097334582,102.698571629317,709.428402671138,104.792924500696,168.138244482262,0,0,0,0,8.89331184778622,5.20559415430487,20.8787979449978,8.71084579738614,12.1208362814101,0,0,0,121.21919381851,67.0228498219967,68.0875209486336,337.5367082645,369.348006810125,280.394893930336,471.611336760663,517.025399332221,184.200078285348,216.258719001335,352.039567223781,285.956580408182,240.233194004249,13.1186775500036,10.6374461381365,0,0,0,3.03127571446259,33.2870879020994,26.9127361063415,1483.68469075629,1172.90986184066,1083.6286246061,1517.03938803824,1075.60863753821,1421.94866290949,1415.90835388521,317.980388621076,582.047335576431,478.554938092466,113.197465562029,367.341006311931,3.62578348774867,6.01519410909855,0.644566922551274,216.310420342119,292.074233482774,274.836773754953,7.21919380651859,6.54630365387526,3.13739907670742,27.7664526841195,30.8210756367197,2.27466768141793,1.36074964221213,16.8414414559669,20.0495428497376,17.8824648778943,11.0371750248068,7.13653564526107,12.4661401339309,3.35812132083267,0,0,10.2580050046556,55.4344751232503,127.873709103071,12.6740444326698,0.0915694648183434,0,8.03971753194641,4.55042172225565,2071.21585569122,23.8776674181541,27.4206538464067,38.2224150068063,26.0511121995763,93.025932055925,85.7048661033091,32.5565716729505,186.344050608621,3.47098322258054,3.84380134730212,1.91419068741876,11.0261981132549,244.97360447967,10791.1376246607,243.266007286049,322.511158444365,298.623683007849,279.248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| ||
|short_description=p1@LOX | |short_description=p1@LOX | ||
}} | }} |
Latest revision as of 23:22, 19 September 2015
Short description: | p1@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOX_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | 0bp_to_ENST00000543620_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | B4DQF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.58e-27 | 76 |
mesodermal cell | 5.57e-21 | 121 |
muscle precursor cell | 1.56e-19 | 58 |
myoblast | 1.56e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-19 | 58 |
muscle cell | 2.03e-18 | 55 |
smooth muscle cell | 2.97e-16 | 43 |
smooth muscle myoblast | 2.97e-16 | 43 |
electrically responsive cell | 9.47e-16 | 61 |
electrically active cell | 9.47e-16 | 61 |
vascular associated smooth muscle cell | 4.42e-13 | 32 |
skin fibroblast | 2.72e-11 | 23 |
embryonic cell | 6.75e-11 | 250 |
preadipocyte | 2.70e-08 | 12 |
multi fate stem cell | 2.56e-07 | 427 |
fat cell | 3.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.63e-07 | 14 |