FFCP PHASE1:Hg19::chr3:122044084..122044106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1475 | |EntrezGene=1475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2481 | |HGNC=2481 | ||
|TSSclassifier=strong | |||
|UniProt=P01040 | |UniProt=P01040 | ||
|association_with_transcript=0bp_to_ENST00000264474_5end | |association_with_transcript=0bp_to_ENST00000264474_5end | ||
|cluster_id=chr3:122044084..122044106,+ | |||
|description=CAGE_peak_1_at_CSTA_5end | |description=CAGE_peak_1_at_CSTA_5end | ||
|id=chr3:122044084..122044106,+ | |id=chr3:122044084..122044106,+ | ||
|ontology_enrichment_celltype=CL:0002009!7.93e-28!65;CL:0002194!2.16e-27!63;CL:0000576!2.16e-27!63;CL:0000040!2.16e-27!63;CL:0000559!2.16e-27!63;CL:0000766!3.27e-26!76;CL:0002057!6.60e-24!42;CL:0000763!9.17e-24!112;CL:0000049!9.17e-24!112;CL:0000557!7.91e-23!71;CL:0000860!7.93e-22!45;CL:0000839!1.89e-21!70;CL:0000738!1.22e-17!140;CL:0000037!4.63e-17!172;CL:0000566!4.63e-17!172;CL:0002032!5.37e-16!165;CL:0000837!5.37e-16!165;CL:0002087!1.17e-15!119;CL:0000988!1.81e-13!182;CL:0002031!8.77e-13!124;CL:0000134!1.55e-09!358;CL:0002320!3.46e-08!365 | |ontology_enrichment_celltype=CL:0002009!7.93e-28!65;CL:0002194!2.16e-27!63;CL:0000576!2.16e-27!63;CL:0000040!2.16e-27!63;CL:0000559!2.16e-27!63;CL:0000766!3.27e-26!76;CL:0002057!6.60e-24!42;CL:0000763!9.17e-24!112;CL:0000049!9.17e-24!112;CL:0000557!7.91e-23!71;CL:0000860!7.93e-22!45;CL:0000839!1.89e-21!70;CL:0000738!1.22e-17!140;CL:0000037!4.63e-17!172;CL:0000566!4.63e-17!172;CL:0002032!5.37e-16!165;CL:0000837!5.37e-16!165;CL:0002087!1.17e-15!119;CL:0000988!1.81e-13!182;CL:0002031!8.77e-13!124;CL:0000134!1.55e-09!358;CL:0002320!3.46e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-18;33!CL:0002057;1.92e-18;33!CL:0000473;2.21e-17;39!CL:0000234;2.21e-17;39!CL:0000576;2.86e-17;48!CL:0000766;9.90e-13;69!CL:0000763;6.40e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,6.65e-31,61;CL:0002194,1.77e-30,59;CL:0000576,1.77e-30,59;CL:0000040,1.77e-30,59;CL:0000559,1.77e-30,59;CL:0000766,5.60e-29,72;CL:0000473,2.90e-27,48;CL:0000234,2.90e-27,48;CL:0000557,2.52e-25,67;CL:0000860,4.70e-25,42;CL:0002057,4.70e-25,42;CL:0000763,5.45e-25,108;CL:0000049,5.45e-25,108;CL:0000839,2.62e-23,66;CL:0000738,1.61e-18,136;CL:0000037,2.82e-17,168;CL:0002087,2.85e-16,115;CL:0002032,4.51e-16,161;CL:0000837,4.51e-16,161;CL:0000988,7.56e-14,177;CL:0002031,4.67e-13,120;CL:0000134,1.64e-09,354;CL:0002320,3.79e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-18;42!CL:0000049;2.40e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.39e-23!102;UBERON:0003061!5.39e-23!102;UBERON:0002371!1.10e-20!80;UBERON:0002193!1.82e-19!112;UBERON:0001474!3.47e-18!86;UBERON:0004765!3.10e-16!101;UBERON:0001434!3.10e-16!101;UBERON:0002405!9.93e-14!115;UBERON:0002384!3.49e-08!375;UBERON:0002204!1.67e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!5.39e-23!102;UBERON:0003061!5.39e-23!102;UBERON:0002371!1.10e-20!80;UBERON:0002193!1.82e-19!112;UBERON:0001474!3.47e-18!86;UBERON:0004765!3.10e-16!101;UBERON:0001434!3.10e-16!101;UBERON:0002405!9.93e-14!115;UBERON:0002384!3.49e-08!375;UBERON:0002204!1.67e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.12e-25,98;UBERON:0003061,3.12e-25,98;UBERON:0002371,2.80e-23,76;UBERON:0002193,4.35e-22,108;UBERON:0001474,3.30e-20,82;UBERON:0002405,1.71e-19,93;UBERON:0004765,1.61e-18,90;UBERON:0001434,1.81e-15,100;UBERON:0002384,4.94e-08,371;UBERON:0003081,2.30e-07,203;UBERON:0002204,4.86e-07,167 | |||
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| ||
|short_description=p1@CSTA | |short_description=p1@CSTA | ||
}} | }} |
Latest revision as of 23:36, 19 September 2015
Short description: | p1@CSTA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSTA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264474_5end |
EntrezGene: | CSTA |
HGNC: | 2481 |
UniProt: | P01040 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 6.65e-31 | 61 |
monopoietic cell | 1.77e-30 | 59 |
monocyte | 1.77e-30 | 59 |
monoblast | 1.77e-30 | 59 |
promonocyte | 1.77e-30 | 59 |
myeloid leukocyte | 5.60e-29 | 72 |
defensive cell | 2.90e-27 | 48 |
phagocyte | 2.90e-27 | 48 |
granulocyte monocyte progenitor cell | 2.52e-25 | 67 |
classical monocyte | 4.70e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.70e-25 | 42 |
myeloid cell | 5.45e-25 | 108 |
common myeloid progenitor | 5.45e-25 | 108 |
myeloid lineage restricted progenitor cell | 2.62e-23 | 66 |
leukocyte | 1.61e-18 | 136 |
hematopoietic stem cell | 2.82e-17 | 168 |
nongranular leukocyte | 2.85e-16 | 115 |
hematopoietic oligopotent progenitor cell | 4.51e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.51e-16 | 161 |
hematopoietic cell | 7.56e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 4.67e-13 | 120 |
mesenchymal cell | 1.64e-09 | 354 |
connective tissue cell | 3.79e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.12e-25 | 98 |
blood island | 3.12e-25 | 98 |
bone marrow | 2.80e-23 | 76 |
hemolymphoid system | 4.35e-22 | 108 |
bone element | 3.30e-20 | 82 |
immune system | 1.71e-19 | 93 |
skeletal element | 1.61e-18 | 90 |
skeletal system | 1.81e-15 | 100 |
connective tissue | 4.94e-08 | 371 |
lateral plate mesoderm | 2.30e-07 | 203 |
musculoskeletal system | 4.86e-07 | 167 |