FFCP PHASE1:Hg19::chr12:66275115..66275137,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=F5H7G5 | |UniProt=F5H7G5 | ||
|association_with_transcript=220bp_to_ENST00000504038,ENST00000536648,uc001sta.1_5end | |association_with_transcript=220bp_to_ENST00000504038,ENST00000536648,uc001sta.1_5end | ||
|cluster_id=chr12:66275115..66275137,- | |||
|description=CAGE_peak_1_at_ENST00000504038_5end,CAGE_peak_1_at_ENST00000536648_5end,CAGE_peak_1_at_uc001sta.1_5end | |description=CAGE_peak_1_at_ENST00000504038_5end,CAGE_peak_1_at_ENST00000536648_5end,CAGE_peak_1_at_uc001sta.1_5end | ||
|id=chr12:66275115..66275137,- | |id=chr12:66275115..66275137,- | ||
|ontology_enrichment_celltype=CL:0000057!7.93e-14!75;CL:0000048!5.41e-12!430;CL:0002320!7.90e-12!365;CL:0000723!2.22e-11!436;CL:0000034!4.51e-11!444;CL:0000134!6.24e-11!358;CL:0002057!1.00e-10!42;CL:0000860!1.58e-09!45;CL:0000055!3.38e-09!180;CL:0000219!4.77e-08!390;CL:0002620!4.11e-07!23 | |ontology_enrichment_celltype=CL:0000057!7.93e-14!75;CL:0000048!5.41e-12!430;CL:0002320!7.90e-12!365;CL:0000723!2.22e-11!436;CL:0000034!4.51e-11!444;CL:0000134!6.24e-11!358;CL:0002057!1.00e-10!42;CL:0000860!1.58e-09!45;CL:0000055!3.38e-09!180;CL:0000219!4.77e-08!390;CL:0002620!4.11e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.89e-14;3!CL:0002617;1.28e-10;2!CL:0002561;3.32e-10;2!CL:0002540;1.01e-07;6!CL:0000135;2.39e-07;3!CL:0000214;2.39e-07;3!CL:0000388;2.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.25e-14,3;CL:0002617,8.36e-11,2;CL:0002561,2.90e-10,2;CL:0002540,7.00e-08,6;CL:0000135,1.86e-07,3;CL:0000388,1.86e-07,3;CL:0000214,2.47e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.52e-11!375;UBERON:0002204!1.58e-10!167;UBERON:0004765!2.23e-10!101;UBERON:0001434!2.23e-10!101;UBERON:0001474!3.11e-07!86;UBERON:0004905!5.71e-07!5;UBERON:0000982!5.71e-07!5;UBERON:0004770!5.71e-07!5 | |ontology_enrichment_uberon=UBERON:0002384!2.52e-11!375;UBERON:0002204!1.58e-10!167;UBERON:0004765!2.23e-10!101;UBERON:0001434!2.23e-10!101;UBERON:0001474!3.11e-07!86;UBERON:0004905!5.71e-07!5;UBERON:0000982!5.71e-07!5;UBERON:0004770!5.71e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.51e-11;10!UBERON:0001443;1.79e-10;11!UBERON:0005933;3.32e-10;2!UBERON:0005942;3.32e-10;2!UBERON:0005932;3.32e-10;2!UBERON:0004905;7.39e-10;8!UBERON:0000982;7.39e-10;8!UBERON:0004770;7.39e-10;8!UBERON:0007846;2.39e-07;3!UBERON:0006915;2.39e-07;3!UBERON:0007616;2.39e-07;3!UBERON:0000043;2.39e-07;3!UBERON:0007845;2.39e-07;3!UBERON:0002217;2.39e-07;3!UBERON:0002018;2.39e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.34e-11,10;UBERON:0001443,1.61e-10,11;UBERON:0005933,2.90e-10,2;UBERON:0005942,2.90e-10,2;UBERON:0005932,2.90e-10,2;UBERON:0004905,1.04e-09,8;UBERON:0000982,1.04e-09,8;UBERON:0004770,1.04e-09,8;UBERON:0007846,1.86e-07,3;UBERON:0000043,1.86e-07,3;UBERON:0007845,1.86e-07,3;UBERON:0006915,2.47e-07,3;UBERON:0007616,2.47e-07,3;UBERON:0002217,2.47e-07,3;UBERON:0002018,2.47e-07,3;UBERON:0002204,9.69e-07,167 | |||
|phase1_expression=2.54349730978779,1.49870366723688,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.866364470720326,3.31397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0,0.697287110717054,0.411167888021826,0.929119112685311,0.575384784644301,0.512321413058201,0.236482229888585,0.689491361473237,1.29096936716765,1.35426486594342,0,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0.426224750532694,0.870627715885752,0.56738522469114,1.86846674698672,0.502497330513487,0,0.65156653411535,1.81619850790011,0.736555271975129,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.724232594804119,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,2.13459757612026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0.354668382198357,0,0,0,0.622422070799533,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0.624320153660641,0.570471821544449,0,0.23486899728753,0.647491777472526,0.280901613404497,0.61246251376468,0.122834317311768,1.54988671763648,1.18800285728205,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0.538168907066586,0,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.292311015483596,0.757301322732344,0.276149695926898,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,0,0.207970861530807,0.178428988797162,0,0,0.902838299183157,0,2.0694614258501,0,0.184369168541703,1.21637060255316,0,0,0,0,0,0,0,0,1.24053903909388,1.2276957863045,1.68396056659844,0.384417447767103,1.53512174720011,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0.328014645699706,0,0.515205058238611,0.457847324091717,0.330037999682352,0,0,0,0,0.308097234229289,0.307007349452259,0,1.28904293841928,0.725083469571143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0,0,0.255897791311334,0,0,0,0.539617372749944,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,1.31178950409327,0,0,0,0.143411352204052,0,0,0,2.53329162357197,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0.223676107892416,0,0,0,0,0,0,0,0,7.47191714286659,0.485442086998054,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641183153813036,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0,0,0,0,0,1.4889757501569,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.367182116944987,0,0,0,0.714695326373367,0,0,0.542999601753713,0,2.28611152076586,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,1.51522404220071,1.50940741051545,4.44905610798268,1.37304041038154,0.756154618816195,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0.800055529326307,1.03018711554838,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0.381382095467167,0,0.397832444232549,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0.806637912890455,0.514464028312255,0.0679697329768317,0,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,0,1.53994210284371,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,1.48798007266701,2.77305377178851,0.865253124247578,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0,0,0,0,0.952257725854961,0,0,0.112131862580613,2.60953348940476,0.606351566874658,0,0,0,1.2192774916755,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0 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| ||
|short_description=p1@ENST00000504038,p1@ENST00000536648,p1@uc001sta.1 | |short_description=p1@ENST00000504038,p1@ENST00000536648,p1@uc001sta.1 | ||
}} | }} |
Latest revision as of 23:39, 19 September 2015
Short description: | p1@ENST00000504038, p1@ENST00000536648, p1@uc001sta.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000504038_5end, CAGE_peak_1_at_ENST00000536648_5end, CAGE_peak_1_at_uc001sta.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 220bp_to_ENST00000504038, ENST00000536648, uc001sta.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.25e-14 | 3 |
adipocyte of breast | 8.36e-11 | 2 |
outer root sheath cell | 2.90e-10 | 2 |
mesenchymal stem cell of the bone marrow | 7.00e-08 | 6 |
fibrocyte | 1.86e-07 | 3 |
tendon cell | 1.86e-07 | 3 |
synovial cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 1.34e-11 | 10 |
chest | 1.61e-10 | 11 |
hair root sheath | 2.90e-10 | 2 |
hair outer root sheath | 2.90e-10 | 2 |
bulb of hair follicle | 2.90e-10 | 2 |
articulation | 1.04e-09 | 8 |
skeletal joint | 1.04e-09 | 8 |
articular system | 1.04e-09 | 8 |
dense regular connective tissue | 1.86e-07 | 3 |
tendon | 1.86e-07 | 3 |
regular connective tissue | 1.86e-07 | 3 |
stratified squamous epithelium | 2.47e-07 | 3 |
layer of synovial tissue | 2.47e-07 | 3 |
synovial joint | 2.47e-07 | 3 |
synovial membrane of synovial joint | 2.47e-07 | 3 |
musculoskeletal system | 9.69e-07 | 167 |