FFCP PHASE1:Hg19::chr12:6644443..6644469,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2597 | |EntrezGene=2597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4141 | |HGNC=4141 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUT4 | |UniProt=E7EUT4 | ||
|association_with_transcript=0bp_to_ENST00000396858,uc001qov.1_5end | |association_with_transcript=0bp_to_ENST00000396858,uc001qov.1_5end | ||
|cluster_id=chr12:6644443..6644469,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_9_at_GAPDH_5end | |description=CAGE_peak_9_at_GAPDH_5end | ||
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|ontology_enrichment_celltype=CL:0000540!9.08e-08!6;CL:0000031!9.08e-08!6;CL:0000404!9.08e-08!6 | |ontology_enrichment_celltype=CL:0000540!9.08e-08!6;CL:0000031!9.08e-08!6;CL:0000404!9.08e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.93e-16;1!CL:0002625;1.93e-16;1!CL:0000216;1.93e-16;1!CL:0002593;6.93e-09;2 | |ontology_enrichment_celltype_v019=CL:0000511;1.93e-16;1!CL:0002625;1.93e-16;1!CL:0000216;1.93e-16;1!CL:0002593;6.93e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.41e-16,1;CL:0002625,1.41e-16,1;CL:0000216,1.41e-16,1;CL:0002593,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.33e-07;10!UBERON:0005564;3.33e-07;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.33e-07;10!UBERON:0005564;3.33e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-07!82 | |ontology_enrichment_uberon=UBERON:0001017!2.07e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.97e-18;8!UBERON:0001136;1.93e-16;1!UBERON:0001343;1.93e-16;1!UBERON:0004910;1.93e-16;1!UBERON:0004813;1.93e-16;1!UBERON:0003135;2.71e-13;11!UBERON:0004909;6.93e-09;2!UBERON:0002456;6.93e-09;2!UBERON:0000991;3.14e-07;21!UBERON:0003101;6.35e-07;22!UBERON:0000079;6.35e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.97e-18;8!UBERON:0001136;1.93e-16;1!UBERON:0001343;1.93e-16;1!UBERON:0004910;1.93e-16;1!UBERON:0004813;1.93e-16;1!UBERON:0003135;2.71e-13;11!UBERON:0004909;6.93e-09;2!UBERON:0002456;6.93e-09;2!UBERON:0000991;3.14e-07;21!UBERON:0003101;6.35e-07;22!UBERON:0000079;6.35e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.43e-18,8;UBERON:0001136,1.41e-16,1;UBERON:0001343,1.41e-16,1;UBERON:0004910,1.41e-16,1;UBERON:0005154,1.41e-16,1;UBERON:0005295,1.41e-16,1;UBERON:0004813,1.41e-16,1;UBERON:0005297,1.41e-16,1;UBERON:0005294,1.41e-16,1;UBERON:0010141,1.41e-16,1;UBERON:0005891,1.41e-16,1;UBERON:0003135,2.50e-13,11;UBERON:0004909,5.94e-09,2;UBERON:0002456,8.74e-09,2;UBERON:0000991,3.01e-07,21;UBERON:0009196,3.01e-07,21;UBERON:0009117,3.01e-07,21;UBERON:0005564,3.01e-07,21;UBERON:0004176,6.10e-07,22;UBERON:0003101,6.10e-07,22;UBERON:0000079,6.10e-07,22 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.246242116153576,0.612002073732759,0,0.286235987131057,0,0,0.229240217243854,0.410502947249729,0.472264687882075,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0.270803863765016,0,0.520237390239513,0.164437904603676,0,0,0,0,0,0,0,0,0.506039384039006,0.637130828648193,0,0,0,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,29.8632292134785,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0.286804595389004,0.609868530647977,1.06023814657188,0.580969714347592,0.207322110030741,0.756962552626885,0.72995471815166,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0.269662616320329,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0,0.329250856225877,1.1240175325762,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0.381988425558278,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0.289562613335158,0,0.537182889719687,0.112085143993527,0,0,0,0,0,2.31986643833309,0.837581326671744,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0,0,0,0.267096106940212,0.165284915360978,0,0,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0.404364963146632,0,0,0,0,1.05650146756755,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.28853842595289,0.0711418433484141,0.797131363644112,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0.21787692703798,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0.234264445725339,0.364909578431332,0.19566461893209,0,0,0,0.91821828489147,0,2.55549813004637,0.518440956986236,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0.0730893170861856,0.0821154570532092,0,0.176512253383001,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0.0824158583811665,0.202210631562555,0,0.0846733320657845,0.795229689809303,0.136203406111576,0.964518890790115,0.550157746388935,0.83088067605837,0,0,0.182248669974074,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0.512483037175893,0,0,0,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0.157723490002507,0,0.352675943690684,0,0.0642292250964595,0,0,0,0.504143392443436,0.207471757392654,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0.328863867814245,0,0,0,0.471346769748006,0,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.467878926924211,0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| ||
|short_description=p9@GAPDH | |short_description=p9@GAPDH | ||
}} | }} |
Latest revision as of 23:50, 19 September 2015
Short description: | p9@GAPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GAPDH_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000396858, uc001qov.1_5end |
EntrezGene: | GAPDH |
HGNC: | 4141 |
UniProt: | E7EUT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.41e-16 | 1 |
seminiferous tubule epithelial cell | 1.41e-16 | 1 |
Sertoli cell | 1.41e-16 | 1 |
smooth muscle cell of the internal thoracic artery | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 4.43e-18 | 8 |
mesothelium | 1.41e-16 | 1 |
seminiferous tubule of testis | 1.41e-16 | 1 |
epithelium of male gonad | 1.41e-16 | 1 |
epithelial cord | 1.41e-16 | 1 |
sex cord | 1.41e-16 | 1 |
seminiferous tubule epithelium | 1.41e-16 | 1 |
testis sex cord | 1.41e-16 | 1 |
genital ridge | 1.41e-16 | 1 |
primitive sex cord of indifferent gonad | 1.41e-16 | 1 |
coelomic epithelium | 1.41e-16 | 1 |
male reproductive organ | 2.50e-13 | 11 |
epithelium of gonad | 5.94e-09 | 2 |
internal thoracic artery | 8.74e-09 | 2 |
gonad | 3.01e-07 | 21 |
indifferent external genitalia | 3.01e-07 | 21 |
indifferent gonad | 3.01e-07 | 21 |
gonad primordium | 3.01e-07 | 21 |
external genitalia | 6.10e-07 | 22 |
male organism | 6.10e-07 | 22 |
male reproductive system | 6.10e-07 | 22 |