FFCP PHASE1:Hg19::chr18:56246628..56246637,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
Line 8: | Line 8: | ||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-61bp_to_AL832018_5end | |association_with_transcript=-61bp_to_AL832018_5end | ||
|cluster_id=chr18:56246628..56246637,- | |||
|description=CAGE_peak_27_at_ALPK2_5end | |description=CAGE_peak_27_at_ALPK2_5end | ||
|id=chr18:56246628..56246637,- | |id=chr18:56246628..56246637,- |
Latest revision as of 00:05, 20 September 2015
Short description: | p27@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_ALPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_AL832018_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p27@ALPK2 |
---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.95e-15 | 23 |
fibroblast | 3.93e-12 | 76 |
receptor cell | 1.06e-11 | 6 |
sensory epithelial cell | 1.06e-11 | 6 |
olfactory epithelial cell | 1.06e-11 | 6 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 9.74e-09 | 1 |
soleus muscle | 9.74e-09 | 1 |
appendage | 9.74e-09 | 1 |
lower limb segment | 9.74e-09 | 1 |
multi-limb segment region | 9.74e-09 | 1 |
hindlimb muscle | 9.74e-09 | 1 |
hindlimb zeugopod muscle | 9.74e-09 | 1 |
paired limb/fin | 9.74e-09 | 1 |
limb | 9.74e-09 | 1 |
pelvic appendage | 9.74e-09 | 1 |
Showing 1 to 10 of 34 entries
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 5.15e-11 | 3 |
peripheral primitive neuroectodermal tumor | 7.75e-09 | 1 |
spindle cell sarcoma | 1.22e-08 | 1 |
musculoskeletal system disease | 5.24e-07 | 5 |
myotonic disease | 5.24e-07 | 5 |
muscle tissue disease | 5.24e-07 | 5 |
myopathy | 5.24e-07 | 5 |
muscular disease | 5.24e-07 | 5 |
myotonic dystrophy | 5.24e-07 | 5 |
Showing 1 to 9 of 9 entries