FFCP PHASE1:Hg19::chr18:56246628..56246637,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
| Line 8: | Line 8: | ||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=-61bp_to_AL832018_5end | |association_with_transcript=-61bp_to_AL832018_5end | ||
|cluster_id=chr18:56246628..56246637,- | |||
|description=CAGE_peak_27_at_ALPK2_5end | |description=CAGE_peak_27_at_ALPK2_5end | ||
|id=chr18:56246628..56246637,- | |id=chr18:56246628..56246637,- | ||
Latest revision as of 00:05, 20 September 2015
| Short description: | p27@ALPK2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_27_at_ALPK2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -61bp_to_AL832018_5end |
| EntrezGene: | ALPK2 |
| HGNC: | 20565 |
| UniProt: | Q86TB3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p27@ALPK2 |
|---|
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1.0
2.0
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4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| skin fibroblast | 2.95e-15 | 23 |
| fibroblast | 3.93e-12 | 76 |
| receptor cell | 1.06e-11 | 6 |
| sensory epithelial cell | 1.06e-11 | 6 |
| olfactory epithelial cell | 1.06e-11 | 6 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| hindlimb bud | 9.74e-09 | 1 |
| soleus muscle | 9.74e-09 | 1 |
| appendage | 9.74e-09 | 1 |
| lower limb segment | 9.74e-09 | 1 |
| multi-limb segment region | 9.74e-09 | 1 |
| hindlimb muscle | 9.74e-09 | 1 |
| hindlimb zeugopod muscle | 9.74e-09 | 1 |
| paired limb/fin | 9.74e-09 | 1 |
| limb | 9.74e-09 | 1 |
| pelvic appendage | 9.74e-09 | 1 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system neoplasm | 5.15e-11 | 3 |
| peripheral primitive neuroectodermal tumor | 7.75e-09 | 1 |
| spindle cell sarcoma | 1.22e-08 | 1 |
| musculoskeletal system disease | 5.24e-07 | 5 |
| myotonic disease | 5.24e-07 | 5 |
| muscle tissue disease | 5.24e-07 | 5 |
| myopathy | 5.24e-07 | 5 |
| muscular disease | 5.24e-07 | 5 |
| myotonic dystrophy | 5.24e-07 | 5 |
Showing 1 to 9 of 9 entries
