FFCP PHASE1:Hg19::chr18:56247066..56247080,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |||
|association_with_transcript=7bp_to_BX647639_5end | |||
|cluster_id=chr18:56247066..56247080,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_23_at_ALPK2_5end | |||
|id=chr18:56247066..56247080,- | |||
|ontology_enrichment_celltype=CL:0000128!6.70e-13!7;CL:0000126!6.70e-13!7;CL:0000127!6.70e-13!7;CL:0002453!6.70e-13!7;CL:0000243!7.54e-11!15;CL:0000125!7.54e-11!15;CL:0000030!7.54e-11!15;CL:0000339!7.54e-11!15;CL:0000453!1.38e-09!5;CL:0000095!1.60e-09!17;CL:0000123!1.60e-09!17;CL:0002605!1.31e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000453;2.41e-22;5!CL:0000990;1.08e-12;8!CL:0000451;1.74e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.50e-22,5;CL:0000990,1.10e-12,8;CL:0000451,1.77e-10,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.91e-07;2!DOID:3910;4.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.09e-07,2;DOID:3910,4.69e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.11e-13!9;UBERON:0001557!1.73e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.29e-07;2!UBERON:0002173;4.29e-07;2!UBERON:0002186;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,8.69e-08,25;UBERON:0009856,1.71e-07,26;UBERON:0004903,4.69e-07,2;UBERON:0002173,4.69e-07,2;UBERON:0002186,4.69e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,1.14494394852423,0.136874425072884,0.376627918784408,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.83370705696798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.309157587715317,0,0.18611685633159,0,0,0.252433774244115,0.460249493211497,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.591534000199219,0.674338760312407,0.241011029883482,0.661763836394364,0.217879444092406,0,0.808987848960987,0.196221465125346,0,0,0,0,0,1.26755034821831,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,2.10998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.271808412147228,1.15063130943567,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,0.494495150286999,0.943649613958588,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,1.10327990218877,0.314727528809989,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.340776043570843,0,2.93104467356165,0,0,0,2.9084762440336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0,0.244736704506468,0,0,0,0,0,0,0.512483037175893,0.345430341731199,0,0,9.74301544196942,19.2654018454376,3.10774249086104,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@ALPK2 | |||
}} |
Latest revision as of 00:08, 20 September 2015
Short description: | p23@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_ALPK2_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 7bp_to_BX647639_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.50e-22 | 5 |
conventional dendritic cell | 1.10e-12 | 8 |
dendritic cell | 1.77e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 8.69e-08 | 25 |
sac | 1.71e-07 | 26 |
bronchoalveolar duct junction | 4.69e-07 | 2 |
alveolar duct | 4.69e-07 | 2 |
bronchiole | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.09e-07 | 2 |
lung adenocarcinoma | 4.69e-07 | 2 |