FFCP PHASE1:Hg19::chrX:152990686..152990697,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=215 | |EntrezGene=215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=61 | |HGNC=61 | ||
|TSSclassifier=strong | |||
|UniProt=P33897 | |UniProt=P33897 | ||
|association_with_transcript=363bp_to_ENST00000218104,NM_000033,uc004fif.2_5end | |association_with_transcript=363bp_to_ENST00000218104,NM_000033,uc004fif.2_5end | ||
|cluster_id=chrX:152990686..152990697,+ | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_6_at_ABCD1_5end | |description=CAGE_peak_6_at_ABCD1_5end | ||
|id=chrX:152990686..152990697,+ | |id=chrX:152990686..152990697,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.49e-07!7;CL:0000586!1.49e-07!7;CL:0002541!2.94e-07!3;CL:0002150!3.33e-07!3;CL:0000861!3.33e-07!3 | |ontology_enrichment_celltype=CL:0000039!1.49e-07!7;CL:0000586!1.49e-07!7;CL:0002541!2.94e-07!3;CL:0002150!3.33e-07!3;CL:0000861!3.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.72e-27;3!CL:0000039;3.45e-26;7!CL:0000586;3.45e-26;7!CL:0002032;6.31e-21;1!CL:0000557;6.31e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.38e-27,3;CL:0000039,3.45e-26,7;CL:0000586,3.45e-26,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.10e-12!106;DOID:14566!1.91e-11!239;DOID:162!2.92e-11!235;DOID:0050687!1.20e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.53e-21;1!DOID:10165;1.53e-21;1!DOID:1798;1.53e-21;1!DOID:3095;8.47e-09;22!DOID:2994;8.47e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.53e-21,1;DOID:10165,1.53e-21,1;DOID:1798,1.53e-21,1;DOID:3095,8.47e-09,22;DOID:2994,8.47e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.45e-18!9;UBERON:0001557!8.01e-09!19;UBERON:0000476!2.94e-07!3;UBERON:0000920!2.94e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!7.45e-18!9;UBERON:0001557!8.01e-09!19;UBERON:0000476!2.94e-07!3;UBERON:0000920!2.94e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.72e-27;3!UBERON:0000920;2.72e-27;3!UBERON:0005631;6.80e-09;10!UBERON:0000158;6.80e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.38e-27,3;UBERON:0003124,2.51e-12,7 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,2.27685187643779,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.337169380156203,0.723033089650446,0.330881918197182,0.217879444092406,0.474541238222193,0.943819157121151,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.929015875628594,0,0,0,0.399158742865633,0,0,0,0,1.36940807419915,0.47003968731907,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0.113942055847001,2.99733075704478,3.68006342080066,0.217294743844016,1.91400695839152,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.65780385377567,0.985385484638511,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.787831823072237,1.07140615895516,0.471824806979294,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,20.6906288640324,0,0.591424344868181,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.305966489225945,0,1.19463369395298,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,2.27685187643779,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.337169380156203,0.723033089650446,0.330881918197182,0.217879444092406,0.474541238222193,0.943819157121151,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.929015875628594,0,0,0,0.399158742865633,0,0,0,0,1.36940807419915,0.47003968731907,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0.435753854075961,0,0,0.113942055847001,2.99733075704478,3.68006342080066,0.217294743844016,1.91400695839152,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.65780385377567,0.985385484638511,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,1.27746588066972,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.787831823072237,1.07140615895516,0.471824806979294,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,20.6906288640324,0,0.591424344868181,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0.126698501011437,0.305966489225945,0,1.19463369395298,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@ABCD1 | |short_description=p6@ABCD1 | ||
}} | }} |
Latest revision as of 00:45, 20 September 2015
Short description: | p6@ABCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ABCD1_5end |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | 363bp_to_ENST00000218104, NM_000033, uc004fif.2_5end |
EntrezGene: | ABCD1 |
HGNC: | 61 |
UniProt: | P33897 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.38e-27 | 3 |
germ line cell | 3.45e-26 | 7 |
germ cell | 3.45e-26 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.38e-27 | 3 |
chorion | 2.51e-12 | 7 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.53e-21 | 1 |
endocrine pancreas cancer | 1.53e-21 | 1 |
pancreatic endocrine carcinoma | 1.53e-21 | 1 |
germ cell and embryonal cancer | 8.47e-09 | 22 |
germ cell cancer | 8.47e-09 | 22 |