FFCP PHASE1:Hg19::chr12:6712299..6712308,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:6712299..6712308,-
|short_description=p40@CHD4
|description=CAGE_peak_40_at_CHD4_5end
|association_with_transcript=0bp_to_ENST00000430771_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1108 | |EntrezGene=1108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1919 | |HGNC=1919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000430771_5end | |||
|cluster_id=chr12:6712299..6712308,- | |||
|description=CAGE_peak_40_at_CHD4_5end | |||
|id=chr12:6712299..6712308,- | |||
|ontology_enrichment_celltype=CL:0000188!3.82e-10!9;CL:0000242!1.74e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000188;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,7.48e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.49e-11!115;UBERON:0003296!1.47e-09!4;UBERON:0010133!1.47e-09!4;UBERON:0001905!3.50e-09!2;UBERON:0002757!3.50e-09!2;UBERON:0010134!3.50e-09!2;UBERON:0002784!3.50e-09!2;UBERON:0005408!3.50e-09!2;UBERON:0001899!3.50e-09!2;UBERON:0001049!5.12e-09!57;UBERON:0005068!5.12e-09!57;UBERON:0006241!5.12e-09!57;UBERON:0007135!5.12e-09!57;UBERON:0005743!7.21e-09!86;UBERON:0001017!2.40e-08!82;UBERON:0000955!7.64e-08!69;UBERON:0006238!7.64e-08!69;UBERON:0000073!1.12e-07!94;UBERON:0001016!1.12e-07!94;UBERON:0002616!2.84e-07!59;UBERON:0001872!3.48e-07!5;UBERON:0003075!6.98e-07!86;UBERON:0007284!6.98e-07!86;UBERON:0002780!8.64e-07!41;UBERON:0001890!8.64e-07!41;UBERON:0006240!8.64e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.99e-98;2!UBERON:0002757;1.99e-98;2!UBERON:0010134;1.99e-98;2!UBERON:0005408;1.99e-98;2!UBERON:0001899;1.99e-98;2!UBERON:0003296;5.82e-50;4!UBERON:0010133;5.82e-50;4!UBERON:0002784;5.82e-50;4!UBERON:0001894;3.92e-29;7!UBERON:0001134;1.89e-13;16!UBERON:0002036;1.89e-13;16!UBERON:0002385;3.53e-07;31!UBERON:0001015;3.53e-07;31!UBERON:0000383;3.53e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-98,2;UBERON:0002757,1.55e-98,2;UBERON:0010134,1.55e-98,2;UBERON:0005408,1.55e-98,2;UBERON:0001899,1.55e-98,2;UBERON:0003296,5.14e-50,4;UBERON:0010133,5.14e-50,4;UBERON:0002784,5.14e-50,4;UBERON:0001894,3.65e-29,7;UBERON:0006222,3.65e-29,7 | |||
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| ||
|short_description=p40@CHD4 | |||
}} | }} |
Latest revision as of 00:46, 20 September 2015
Short description: | p40@CHD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_CHD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000430771_5end |
EntrezGene: | CHD4 |
HGNC: | 1919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-98 | 2 |
regional part of epithalamus | 1.55e-98 | 2 |
secretory circumventricular organ | 1.55e-98 | 2 |
circumventricular organ | 1.55e-98 | 2 |
epithalamus | 1.55e-98 | 2 |
gland of diencephalon | 5.14e-50 | 4 |
neuroendocrine gland | 5.14e-50 | 4 |
regional part of diencephalon | 5.14e-50 | 4 |
diencephalon | 3.65e-29 | 7 |
future diencephalon | 3.65e-29 | 7 |