FFCP PHASE1:Hg19::chr5:125695855..125695862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |HGNC=24911 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6D8 | |UniProt=B7Z6D8 | ||
|association_with_transcript=31bp_to_ENST00000513040_5end | |association_with_transcript=31bp_to_ENST00000513040_5end | ||
|cluster_id=chr5:125695855..125695862,+ | |||
|coexpression_cluster_id=C4457 | |||
|description=CAGE_peak_40_at_GRAMD3_5end | |description=CAGE_peak_40_at_GRAMD3_5end | ||
|id=chr5:125695855..125695862,+ | |id=chr5:125695855..125695862,+ | ||
|ontology_enrichment_celltype=CL:0000453!2.08e-17!5;CL:0002541!4.56e-13!3;CL:0000990!6.48e-10!8;CL:0000451!3.36e-08!10 | |ontology_enrichment_celltype=CL:0000453!2.08e-17!5;CL:0002541!4.56e-13!3;CL:0000990!6.48e-10!8;CL:0000451!3.36e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.96e-34;2!CL:0001016;5.96e-34;2!CL:0000453;1.71e-14;5!CL:0000840;2.59e-12;5!CL:0000990;1.16e-08;8!CL:0000451;2.55e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.04e-34,2;CL:0001016,5.04e-34,2;CL:0000453,1.60e-14,5;CL:0000840,2.45e-12,5;CL:0001029,2.45e-12,5;CL:0000990,1.12e-08,8;CL:0000451,2.47e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.23e-66;1!UBERON:0004872;8.16e-11;7!UBERON:0005795;5.73e-08;10 | |||
|ontology_enrichment_disease=DOID:3371!3.61e-10!1;DOID:4549!3.61e-10!1;DOID:5861!3.61e-10!1;DOID:6496!3.61e-10!1;DOID:170!5.26e-07!6 | |ontology_enrichment_disease=DOID:3371!3.61e-10!1;DOID:4549!3.61e-10!1;DOID:5861!3.61e-10!1;DOID:6496!3.61e-10!1;DOID:170!5.26e-07!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!4.56e-13!3;UBERON:0000920!4.56e-13!3;UBERON:0003124!1.91e-12!7;UBERON:0005631!1.06e-10!14;UBERON:0000158!1.06e-10!14;UBERON:0001282!1.19e-10!1;UBERON:0009842!1.19e-10!1;UBERON:0003704!1.19e-10!1;UBERON:0001171!1.19e-10!1;UBERON:0001172!1.19e-10!1 | |ontology_enrichment_uberon=UBERON:0000476!4.56e-13!3;UBERON:0000920!4.56e-13!3;UBERON:0003124!1.91e-12!7;UBERON:0005631!1.06e-10!14;UBERON:0000158!1.06e-10!14;UBERON:0001282!1.19e-10!1;UBERON:0009842!1.19e-10!1;UBERON:0003704!1.19e-10!1;UBERON:0001171!1.19e-10!1;UBERON:0001172!1.19e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.35e-18;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,7.35e-18,4;UBERON:0004340,7.35e-18,4;UBERON:0003124,8.16e-11,7 | |||
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|short_description=p40@GRAMD3 | |short_description=p40@GRAMD3 | ||
}} | }} |
Latest revision as of 00:59, 20 September 2015
Short description: | p40@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_GRAMD3_5end |
Coexpression cluster: | C4457_placenta_immature_Mast_breast_colon_small_migratory |
Association with transcript: | 31bp_to_ENST00000513040_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z6D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.04e-34 | 2 |
immature CD1a-positive Langerhans cell | 5.04e-34 | 2 |
Langerhans cell | 1.60e-14 | 5 |
immature conventional dendritic cell | 2.45e-12 | 5 |
common dendritic progenitor | 2.45e-12 | 5 |
conventional dendritic cell | 1.12e-08 | 8 |
dendritic cell | 2.47e-07 | 10 |