FFCP PHASE1:Hg19::chr5:125758896..125758905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |HGNC=24911 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z3R1,B7Z1F2,Q96HH9 | |UniProt=B7Z3R1,B7Z1F2,Q96HH9 | ||
|association_with_transcript=27bp_to_ENST00000542322,ENST00000544396,NM_001146320,NM_001146321,NM_023927,uc003ktu.2,uc011cwv.1,uc011cww.1,uc011cwx.1_5end | |association_with_transcript=27bp_to_ENST00000542322,ENST00000544396,NM_001146320,NM_001146321,NM_023927,uc003ktu.2,uc011cwv.1,uc011cww.1,uc011cwx.1_5end | ||
|cluster_id=chr5:125758896..125758905,+ | |||
|description=CAGE_peak_29_at_GRAMD3_5end | |description=CAGE_peak_29_at_GRAMD3_5end | ||
|id=chr5:125758896..125758905,+ | |id=chr5:125758896..125758905,+ | ||
|ontology_enrichment_celltype=CL:0002579!7.25e-07!3;CL:0002580!7.97e-07!3 | |ontology_enrichment_celltype=CL:0002579!7.25e-07!3;CL:0002580!7.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002617;1.86e-31;2!CL:0000197;1.56e-23;6!CL:0000098;1.56e-23;6!CL:0002167;1.56e-23;6!CL:0002580;2.40e-21;3!CL:0002334;4.18e-12;12!CL:0000136;3.20e-11;13!CL:0000710;1.73e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,3.46e-31,2;CL:0000197,6.70e-24,6;CL:0000098,6.70e-24,6;CL:0002167,6.70e-24,6;CL:0002580,2.17e-21,3;CL:0002334,5.06e-12,12;CL:0000136,9.76e-10,15;CL:0000710,1.35e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;9.80e-25;10!UBERON:0001443;1.58e-22;11!UBERON:0003688;3.56e-11;6!UBERON:0002358;3.56e-11;6!UBERON:0003684;3.56e-11;6!UBERON:0001178;3.56e-11;6!UBERON:0004457;9.51e-08;9!UBERON:0000042;9.51e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.18e-24,10;UBERON:0001443,1.88e-22,11;UBERON:0003688,5.09e-11,6;UBERON:0002358,5.09e-11,6;UBERON:0003684,5.09e-11,6;UBERON:0001178,5.09e-11,6 | |||
|phase1_expression=1.2717486548939,1.07050261945492,1.12763523276777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0,0,0.501559486172034,0.651844533267181,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0.389748020644795,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.24900292158013,1.57702415033935,1.7571212248907,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.213455115606889,0,0,0,0.248107807818777,1.38115775959256,1.12264037773229,0.512556597022804,1.02341449813341,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0.0821154570532092,0.193978032976839,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.509781344063451,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=1.2717486548939,1.07050261945492,1.12763523276777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0,0,0.501559486172034,0.651844533267181,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52054421143703,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0.389748020644795,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,1.24900292158013,1.57702415033935,1.7571212248907,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.213455115606889,0,0,0,0.248107807818777,1.38115775959256,1.12264037773229,0.512556597022804,1.02341449813341,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0.0821154570532092,0.193978032976839,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.509781344063451,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p29@GRAMD3 | |short_description=p29@GRAMD3 | ||
}} | }} |
Latest revision as of 01:08, 20 September 2015
Short description: | p29@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_GRAMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000542322, ENST00000544396, NM_001146320, NM_001146321, NM_023927, uc003ktu.2, uc011cwv.1, uc011cww.1, uc011cwx.1_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z3R1B7Z1F2Q96HH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 3.46e-31 | 2 |
receptor cell | 6.70e-24 | 6 |
sensory epithelial cell | 6.70e-24 | 6 |
olfactory epithelial cell | 6.70e-24 | 6 |
preadipocyte of the breast | 2.17e-21 | 3 |
preadipocyte | 5.06e-12 | 12 |
fat cell | 9.76e-10 | 15 |
neurecto-epithelial cell | 1.35e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
breast | 1.18e-24 | 10 |
chest | 1.88e-22 | 11 |
omentum | 5.09e-11 | 6 |
peritoneum | 5.09e-11 | 6 |
abdominal cavity | 5.09e-11 | 6 |
visceral peritoneum | 5.09e-11 | 6 |