FFCP PHASE1:Hg19::chr7:92848878..92848889,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27364 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000341723_5end | |||
|cluster_id=chr7:92848878..92848889,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_2_at_HEPACAM2_5end | |||
|id=chr7:92848878..92848889,- | |||
|ontology_enrichment_celltype=CL:0000764!7.35e-12!2;CL:0000765!7.35e-12!2;CL:0000050!7.35e-12!2;CL:0000038!7.35e-12!2;CL:0000558!7.35e-12!2;CL:0000547!7.35e-12!2;CL:0000549!7.35e-12!2;CL:0000550!7.35e-12!2;CL:0000552!7.35e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.29e-34;2!CL:0000558;4.29e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.62e-34,2;CL:0000765,3.62e-34,2;CL:0000050,3.62e-34,2;CL:0000038,3.62e-34,2;CL:0000558,3.62e-34,2;CL:0000547,3.62e-34,2;CL:0000549,3.62e-34,2;CL:0000550,3.62e-34,2;CL:0000552,3.62e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.19e-15!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.91e-12!15;UBERON:0000179!4.91e-12!15;UBERON:0000463!4.91e-12!15;UBERON:0002133!4.76e-11!2;UBERON:0005409!2.13e-10!35;UBERON:0001155!9.68e-10!9;UBERON:0007023!3.63e-09!115;UBERON:0000160!1.88e-08!27;UBERON:0000059!5.64e-08!11;UBERON:0003978!1.21e-07!3;UBERON:0009751!1.21e-07!3;UBERON:0000946!1.21e-07!3;UBERON:0002523!1.21e-07!3;UBERON:0005983!1.21e-07!3;UBERON:0002165!1.21e-07!3;UBERON:0002062!1.21e-07!3;UBERON:0007280!1.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.74e-33;17!UBERON:0002108;3.86e-30;4!UBERON:0005409;9.57e-26;22!UBERON:0001155;2.15e-17;9!UBERON:0004921;1.17e-15;33!UBERON:0000059;2.35e-14;11!UBERON:0000178;1.65e-10;15!UBERON:0000179;1.65e-10;15!UBERON:0000463;1.65e-10;15!UBERON:0002114;8.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.37e-33,17;UBERON:0002108,4.26e-30,4;UBERON:0005409,8.71e-23,25;UBERON:0001155,1.92e-17,9;UBERON:0000059,2.15e-14,11;UBERON:0000178,1.71e-10,15;UBERON:0000179,1.71e-10,15;UBERON:0000463,1.71e-10,15;UBERON:0007023,9.44e-09,114;UBERON:0002114,9.64e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38519753291869,2.61435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.53723804616085,0.764637207142375,0.569647187174163,0,0.411362273086194,0,1.62009431171434,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.451191321234361,0.392125068635479,0.335643173951685,0,0.158936578980379,0,0,0,0,11.9431431729421,2.91909962861019,18.9419344929424,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93588206350518,1.96703604453562,0,0,0,0,0,0.4226557275834,0,0,0.966868319603658,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p2@HEPACAM2 | |||
}} |
Latest revision as of 01:08, 20 September 2015
Short description: | p2@HEPACAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HEPACAM2_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 5bp_to_ENST00000341723_5end |
EntrezGene: | HEPACAM2 |
HGNC: | 27364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.62e-34 | 2 |
erythroblast | 3.62e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 3.62e-34 | 2 |
erythroid progenitor cell | 3.62e-34 | 2 |
reticulocyte | 3.62e-34 | 2 |
proerythroblast | 3.62e-34 | 2 |
basophilic erythroblast | 3.62e-34 | 2 |
polychromatophilic erythroblast | 3.62e-34 | 2 |
orthochromatic erythroblast | 3.62e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.37e-33 | 17 |
small intestine | 4.26e-30 | 4 |
gastrointestinal system | 8.71e-23 | 25 |
colon | 1.92e-17 | 9 |
large intestine | 2.15e-14 | 11 |
blood | 1.71e-10 | 15 |
haemolymphatic fluid | 1.71e-10 | 15 |
organism substance | 1.71e-10 | 15 |
adult organism | 9.44e-09 | 114 |
duodenum | 9.64e-07 | 2 |