FFCP PHASE1:Hg19::chr3:123419964..123419975,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |EntrezGene=4638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7590 | |HGNC=7590 | ||
|TSSclassifier=strong | |||
|UniProt=Q15746 | |UniProt=Q15746 | ||
|association_with_transcript=-291bp_to_AB037663_5end | |association_with_transcript=-291bp_to_AB037663_5end | ||
|cluster_id=chr3:123419964..123419975,- | |||
|coexpression_cluster_id=C1918 | |||
|description=CAGE_peak_13_at_MYLK_5end | |description=CAGE_peak_13_at_MYLK_5end | ||
|id=chr3:123419964..123419975,- | |id=chr3:123419964..123419975,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.77e-08;2!UBERON:0006603;3.94e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-65!115;UBERON:0001049!5.92e-22!57;UBERON:0005068!5.92e-22!57;UBERON:0006241!5.92e-22!57;UBERON:0007135!5.92e-22!57;UBERON:0003075!3.48e-17!86;UBERON:0007284!3.48e-17!86;UBERON:0003080!3.78e-17!42;UBERON:0002616!6.59e-17!59;UBERON:0002780!4.50e-16!41;UBERON:0001890!4.50e-16!41;UBERON:0006240!4.50e-16!41;UBERON:0002020!5.51e-16!34;UBERON:0003528!5.51e-16!34;UBERON:0002346!6.71e-16!90;UBERON:0001893!9.77e-16!34;UBERON:0001869!2.32e-15!32;UBERON:0001017!6.50e-15!82;UBERON:0005743!7.08e-15!86;UBERON:0002791!8.52e-15!33;UBERON:0000955!5.68e-14!69;UBERON:0006238!5.68e-14!69;UBERON:0000073!2.68e-13!94;UBERON:0001016!2.68e-13!94;UBERON:0002619!4.80e-12!22;UBERON:0003056!1.56e-11!61;UBERON:0000956!3.65e-10!25;UBERON:0000203!3.65e-10!25;UBERON:0001950!4.55e-10!20;UBERON:0000153!5.02e-10!129;UBERON:0007811!5.02e-10!129;UBERON:0000033!9.25e-10!123;UBERON:0000062!1.00e-09!511;UBERON:0004111!2.48e-09!241;UBERON:0003133!4.45e-09!48;UBERON:0000477!8.71e-09!286;UBERON:0004121!9.58e-09!169;UBERON:0000468!2.46e-08!659;UBERON:0000924!2.90e-08!173;UBERON:0006601!2.90e-08!173;UBERON:0000922!5.08e-08!612;UBERON:0005156!5.41e-08!59;UBERON:0000990!5.41e-08!59;UBERON:0000025!6.52e-08!194;UBERON:0002308!9.87e-08!9;UBERON:0000125!9.87e-08!9;UBERON:0002050!1.55e-07!605;UBERON:0005423!1.55e-07!605;UBERON:0002323!2.33e-07!46;UBERON:0000467!3.98e-07!625;UBERON:0000923!4.27e-07!604;UBERON:0005291!4.27e-07!604;UBERON:0006598!4.27e-07!604;UBERON:0002532!4.27e-07!604;UBERON:0000480!4.56e-07!626;UBERON:0000064!6.82e-07!219 | |ontology_enrichment_uberon=UBERON:0007023!1.17e-65!115;UBERON:0001049!5.92e-22!57;UBERON:0005068!5.92e-22!57;UBERON:0006241!5.92e-22!57;UBERON:0007135!5.92e-22!57;UBERON:0003075!3.48e-17!86;UBERON:0007284!3.48e-17!86;UBERON:0003080!3.78e-17!42;UBERON:0002616!6.59e-17!59;UBERON:0002780!4.50e-16!41;UBERON:0001890!4.50e-16!41;UBERON:0006240!4.50e-16!41;UBERON:0002020!5.51e-16!34;UBERON:0003528!5.51e-16!34;UBERON:0002346!6.71e-16!90;UBERON:0001893!9.77e-16!34;UBERON:0001869!2.32e-15!32;UBERON:0001017!6.50e-15!82;UBERON:0005743!7.08e-15!86;UBERON:0002791!8.52e-15!33;UBERON:0000955!5.68e-14!69;UBERON:0006238!5.68e-14!69;UBERON:0000073!2.68e-13!94;UBERON:0001016!2.68e-13!94;UBERON:0002619!4.80e-12!22;UBERON:0003056!1.56e-11!61;UBERON:0000956!3.65e-10!25;UBERON:0000203!3.65e-10!25;UBERON:0001950!4.55e-10!20;UBERON:0000153!5.02e-10!129;UBERON:0007811!5.02e-10!129;UBERON:0000033!9.25e-10!123;UBERON:0000062!1.00e-09!511;UBERON:0004111!2.48e-09!241;UBERON:0003133!4.45e-09!48;UBERON:0000477!8.71e-09!286;UBERON:0004121!9.58e-09!169;UBERON:0000468!2.46e-08!659;UBERON:0000924!2.90e-08!173;UBERON:0006601!2.90e-08!173;UBERON:0000922!5.08e-08!612;UBERON:0005156!5.41e-08!59;UBERON:0000990!5.41e-08!59;UBERON:0000025!6.52e-08!194;UBERON:0002308!9.87e-08!9;UBERON:0000125!9.87e-08!9;UBERON:0002050!1.55e-07!605;UBERON:0005423!1.55e-07!605;UBERON:0002323!2.33e-07!46;UBERON:0000467!3.98e-07!625;UBERON:0000923!4.27e-07!604;UBERON:0005291!4.27e-07!604;UBERON:0006598!4.27e-07!604;UBERON:0002532!4.27e-07!604;UBERON:0000480!4.56e-07!626;UBERON:0000064!6.82e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.89e-12;3!UBERON:0004054;7.89e-12;3!UBERON:0004175;5.36e-10;21!UBERON:0005904;5.70e-09;4!UBERON:0000160;8.52e-09;17!UBERON:0003133;1.39e-08;44!UBERON:0003135;4.27e-08;11!UBERON:0000059;4.75e-08;11!UBERON:0002148;7.77e-08;2!UBERON:0006331;7.77e-08;2!UBERON:0009662;7.77e-08;2!UBERON:0007023;5.90e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.20e-28,114;UBERON:0006947,8.98e-12,3;UBERON:0004054,8.98e-12,3;UBERON:0003133,5.85e-10,48;UBERON:0005409,1.28e-09,25;UBERON:0005156,5.63e-09,59;UBERON:0000990,5.63e-09,59;UBERON:0000160,6.27e-09,17;UBERON:0005904,6.27e-09,4;UBERON:0000059,3.48e-08,11;UBERON:0004175,3.78e-08,25;UBERON:0003135,4.18e-08,11;UBERON:0002148,9.93e-08,2;UBERON:0006331,9.93e-08,2;UBERON:0009662,9.93e-08,2;UBERON:0002323,2.97e-07,46;UBERON:0003886,4.86e-07,54;UBERON:0002553,5.16e-07,61;UBERON:0001155,9.41e-07,9 | |||
|phase1_expression=0.363356758541113,0,1.83240725324762,0,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25500986535793,5.2003718455683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.562677665642051,0,0,0,4.98119970627674,1.93398740871803,0.755798243562828,0,0,0,0,0,0,6.01724774385295,0,0,0,1.39152147242777,0,0,0,1.44999915086959,0,0,0,0,0,0,0,1.20596438625408,0,0.110579259931225,0,1.09692698576986,0,0,9.69573257147843,0,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,5.39591143470369,3.66618086960175,0,0,0,0.876214728748802,0,0.234264445725339,0,0,0,5.91876604274086,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,5.62536295632833,0,1.12990370390266,0,0,0.633107959558787,0,0,3.84215390530835,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0.558564802544508,3.20824593616357,0,0,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.91124334987037,0,0.315222829196793,1.52118305591495,0,0,0,1.42939065274673,0,0,3.25799761052228,0,1.30634944043764,0,0,0,0,0.58620893471233,0,2.32709321450791,1.19009341568421,0,0,2.99004755189545,1.25763444079733,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.3755727921195,0,0.221858103073705,1.1177352529449,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0.477890301491107,0.449803112163605,0.310525913752519,0,0,2.60872530905867,0,0,0.406870733204662,0,0,2.32016879939247,3.18476710958893,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.706521476061055,0,0.638535436228605,0.41023272848151,0,0.829887029570615,1.13032951942296,0,0,0,0,0.115525666150338,0,0,0.596748666348824,6.54329856638538,0,0,0,0,0,0.607838261565552,0.781078098613847,0.206686796501184,0.760989722326882,0,1.09651553371436,2.97726707033577,0,0,0,0,0,0,0.532214220975833,0,0,0.611727596791485,0.986591603442736,0,0,6.59341979944318,0.785577949580009,0,2.73947616152849,0,0,3.64530375300947,0,0,0,0,0,0,0,0.430227358820278,0,0,3.38709640152743,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,2.00652811080656,0.874238242015829,0,9.56078454840231,0,0.785233868459781,0.297046400327086,0.4226557275834,0,2.44358186747619,2.90060495881097,0,0,0,0,0,0.917458566809082,0,0,1.22384682343646,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,2.5006970412019,0.267964130156178,0.829169439458779,0.827463966895162,0,0.476128862927481,0,0.124149428591716,0,0.12729431655633,0.202117188958219,0,0,0.202056159043763,0.78894425931944,0,0,0,0,0,2.34640942403454,4.15620910221746,3.66206560484165,3.32878387092756,0.805095174364105,0 | |phase1_expression=0.363356758541113,0,1.83240725324762,0,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25500986535793,5.2003718455683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.562677665642051,0,0,0,4.98119970627674,1.93398740871803,0.755798243562828,0,0,0,0,0,0,6.01724774385295,0,0,0,1.39152147242777,0,0,0,1.44999915086959,0,0,0,0,0,0,0,1.20596438625408,0,0.110579259931225,0,1.09692698576986,0,0,9.69573257147843,0,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,5.39591143470369,3.66618086960175,0,0,0,0.876214728748802,0,0.234264445725339,0,0,0,5.91876604274086,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,5.62536295632833,0,1.12990370390266,0,0,0.633107959558787,0,0,3.84215390530835,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,0,0.558564802544508,3.20824593616357,0,0,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.91124334987037,0,0.315222829196793,1.52118305591495,0,0,0,1.42939065274673,0,0,3.25799761052228,0,1.30634944043764,0,0,0,0,0.58620893471233,0,2.32709321450791,1.19009341568421,0,0,2.99004755189545,1.25763444079733,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.610131324509816,0.3755727921195,0,0.221858103073705,1.1177352529449,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0.477890301491107,0.449803112163605,0.310525913752519,0,0,2.60872530905867,0,0,0.406870733204662,0,0,2.32016879939247,3.18476710958893,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.706521476061055,0,0.638535436228605,0.41023272848151,0,0.829887029570615,1.13032951942296,0,0,0,0,0.115525666150338,0,0,0.596748666348824,6.54329856638538,0,0,0,0,0,0.607838261565552,0.781078098613847,0.206686796501184,0.760989722326882,0,1.09651553371436,2.97726707033577,0,0,0,0,0,0,0.532214220975833,0,0,0.611727596791485,0.986591603442736,0,0,6.59341979944318,0.785577949580009,0,2.73947616152849,0,0,3.64530375300947,0,0,0,0,0,0,0,0.430227358820278,0,0,3.38709640152743,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,2.00652811080656,0.874238242015829,0,9.56078454840231,0,0.785233868459781,0.297046400327086,0.4226557275834,0,2.44358186747619,2.90060495881097,0,0,0,0,0,0.917458566809082,0,0,1.22384682343646,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,2.5006970412019,0.267964130156178,0.829169439458779,0.827463966895162,0,0.476128862927481,0,0.124149428591716,0,0.12729431655633,0.202117188958219,0,0,0.202056159043763,0.78894425931944,0,0,0,0,0,2.34640942403454,4.15620910221746,3.66206560484165,3.32878387092756,0.805095174364105,0 | ||
|short_description=p13@MYLK | |short_description=p13@MYLK | ||
}} | }} |
Latest revision as of 01:37, 20 September 2015
Short description: | p13@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MYLK_5end |
Coexpression cluster: | C1918_smooth_leiomyoma_bladder_Mesenchymal_cervix_esophagus_prostate |
Association with transcript: | -291bp_to_AB037663_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | Q15746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.20e-28 | 114 |
male genital duct | 8.98e-12 | 3 |
internal male genitalia | 8.98e-12 | 3 |
reproductive organ | 5.85e-10 | 48 |
gastrointestinal system | 1.28e-09 | 25 |
reproductive structure | 5.63e-09 | 59 |
reproductive system | 5.63e-09 | 59 |
intestine | 6.27e-09 | 17 |
duct of male reproductive system | 6.27e-09 | 4 |
large intestine | 3.48e-08 | 11 |
internal genitalia | 3.78e-08 | 25 |
male reproductive organ | 4.18e-08 | 11 |
locus ceruleus | 9.93e-08 | 2 |
brainstem nucleus | 9.93e-08 | 2 |
hindbrain nucleus | 9.93e-08 | 2 |
body cavity | 2.97e-07 | 46 |
body cavity precursor | 4.86e-07 | 54 |
anatomical cavity | 5.16e-07 | 61 |
colon | 9.41e-07 | 9 |