FFCP PHASE1:Hg19::chr5:126113053..126113064,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000463908_5end | |association_with_transcript=-6bp_to_ENST00000463908_5end | ||
|cluster_id=chr5:126113053..126113064,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_7_at_LMNB1_5end | |description=CAGE_peak_7_at_LMNB1_5end | ||
|id=chr5:126113053..126113064,+ | |id=chr5:126113053..126113064,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.39e-10;6!CL:0000404;4.39e-10;6!CL:0000182;1.84e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.58e-13,8;CL:0000540,4.07e-10,6;CL:0000031,4.07e-10,6;CL:0000404,4.07e-10,6;CL:0000182,1.07e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000031;4.39e-10;6 | |||
|ontology_enrichment_disease=DOID:162!5.21e-19!235;DOID:14566!6.35e-19!239;DOID:0050687!1.59e-14!143;DOID:305!4.01e-13!106;DOID:0050686!5.14e-08!137;DOID:2531!2.58e-07!51;DOID:0060083!2.58e-07!51 | |ontology_enrichment_disease=DOID:162!5.21e-19!235;DOID:14566!6.35e-19!239;DOID:0050687!1.59e-14!143;DOID:305!4.01e-13!106;DOID:0050686!5.14e-08!137;DOID:2531!2.58e-07!51;DOID:0060083!2.58e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.53e-07;1!DOID:10165;1.53e-07;1!DOID:1798;1.53e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.22e-07,1;DOID:10165,1.22e-07,1;DOID:1798,1.22e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@LMNB1 | |short_description=p7@LMNB1 | ||
}} | }} |
Latest revision as of 01:39, 20 September 2015
Short description: | p7@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LMNB1_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -6bp_to_ENST00000463908_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.58e-13 | 8 |
neuron | 4.07e-10 | 6 |
neuroblast | 4.07e-10 | 6 |
electrically signaling cell | 4.07e-10 | 6 |
hepatocyte | 1.07e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.22e-07 | 1 |
endocrine pancreas cancer | 1.22e-07 | 1 |
pancreatic endocrine carcinoma | 1.22e-07 | 1 |