FFCP PHASE1:Hg19::chr5:126147409..126147430,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:126147409..126147430,+ to FFCP PHASE1:Hg19::chr5:126147409..126147430,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000494185_5end | |||
|cluster_id=chr5:126147409..126147430,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_LMNB1_5end | |||
|id=chr5:126147409..126147430,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.99e-38!140;CL:0002057!3.05e-33!42;CL:0002031!3.69e-31!124;CL:0000037!1.88e-30!172;CL:0000566!1.88e-30!172;CL:0000860!8.91e-30!45;CL:0000988!5.27e-29!182;CL:0002032!2.04e-28!165;CL:0000837!2.04e-28!165;CL:0002087!6.42e-28!119;CL:0000766!6.27e-27!76;CL:0000839!4.43e-21!70;CL:0000557!9.92e-21!71;CL:0000763!9.30e-19!112;CL:0000049!9.30e-19!112;CL:0002009!2.28e-18!65;CL:0002194!1.84e-17!63;CL:0000576!1.84e-17!63;CL:0000040!1.84e-17!63;CL:0000559!1.84e-17!63;CL:0000791!6.19e-12!18;CL:0000789!6.19e-12!18;CL:0002420!6.19e-12!18;CL:0002419!6.19e-12!18;CL:0000790!6.19e-12!18;CL:0000838!1.74e-09!52;CL:0000094!2.99e-09!8;CL:0000542!4.13e-09!53;CL:0000051!4.13e-09!53;CL:0000084!7.09e-09!25;CL:0000827!7.09e-09!25;CL:0000625!1.76e-08!11;CL:0000081!4.48e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.12e-46;33!CL:0002057;3.12e-46;33!CL:0000473;2.77e-31;39!CL:0000234;2.77e-31;39!CL:0000576;1.57e-25;48!CL:0000766;1.09e-20;69!CL:0002087;2.59e-16;104!CL:0000094;6.25e-16;8!CL:0000791;3.91e-15;18!CL:0000789;3.91e-15;18!CL:0002419;3.91e-15;18!CL:0000084;1.59e-11;25!CL:0000081;4.67e-11;11!CL:0000738;9.45e-11;136!CL:0000624;3.93e-10;6!CL:0000763;3.65e-09;100!CL:0000988;1.82e-08;177!CL:0000625;2.32e-08;11!CL:0000542;2.15e-07;53!CL:0000775;2.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.99e-52,136;CL:0000860,1.63e-48,42;CL:0002057,1.63e-48,42;CL:0002087,3.64e-44,115;CL:0000766,5.15e-43,72;CL:0000473,6.13e-41,48;CL:0000234,6.13e-41,48;CL:0002031,2.86e-40,120;CL:0000037,1.44e-39,168;CL:0002032,6.23e-38,161;CL:0000837,6.23e-38,161;CL:0000988,1.76e-36,177;CL:0002194,2.18e-30,59;CL:0000576,2.18e-30,59;CL:0000040,2.18e-30,59;CL:0000559,2.18e-30,59;CL:0000839,8.11e-30,66;CL:0000557,3.37e-29,67;CL:0002009,4.94e-29,61;CL:0000763,3.67e-25,108;CL:0000049,3.67e-25,108;CL:0000094,5.70e-16,8;CL:0000791,3.78e-15,18;CL:0000789,3.78e-15,18;CL:0002420,3.78e-15,18;CL:0002419,3.78e-15,18;CL:0000790,3.78e-15,18;CL:0000838,7.09e-12,52;CL:0000084,1.47e-11,25;CL:0000827,1.47e-11,25;CL:0000542,1.56e-11,53;CL:0000051,1.56e-11,53;CL:0000081,4.38e-11,11;CL:0000624,3.55e-10,6;CL:0000134,1.73e-08,354;CL:0000625,2.40e-08,11;CL:0002320,5.44e-08,361;CL:0000775,2.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-34;42!CL:0000790;3.91e-15;18!CL:0000049;1.80e-07;108!CL:0000051;2.15e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.14e-32!112;UBERON:0002390!1.56e-28!102;UBERON:0003061!1.56e-28!102;UBERON:0002371!5.71e-17!80;UBERON:0002405!3.18e-16!115;UBERON:0001474!1.61e-14!86;UBERON:0003081!3.27e-14!216;UBERON:0000178!2.31e-13!15;UBERON:0000179!2.31e-13!15;UBERON:0000463!2.31e-13!15;UBERON:0007023!2.96e-10!115;UBERON:0004765!7.09e-10!101;UBERON:0001434!7.09e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.77e-17;15!UBERON:0000179;6.77e-17;15!UBERON:0000463;6.77e-17;15!UBERON:0002193;1.22e-08;42!UBERON:0002390;3.89e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.82e-42,108;UBERON:0002390,4.49e-39,98;UBERON:0003061,4.49e-39,98;UBERON:0002405,3.08e-28,93;UBERON:0002371,2.23e-24,76;UBERON:0001474,9.20e-22,82;UBERON:0004765,7.83e-19,90;UBERON:0000178,6.50e-17,15;UBERON:0000179,6.50e-17,15;UBERON:0000463,6.50e-17,15;UBERON:0001434,7.47e-16,100;UBERON:0003081,2.96e-12,203;UBERON:0002384,1.02e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5023207636678,14.2016877295969,3.71558695958582,0,0,0,0,0,0,6.64794490238253,5.01361118675354,2.60413044859022,0,0,0,12.2134520574834,5.29026321164333,10.6736986922639,16.2700325833979,3.28934310417461,12.6979612066992,16.3984663623626,7.17249978281482,22.229329609527,18.6162667597774,3.22742341791913,25.7310324529249,18.07126459609,3.547779950752,25.1690302578495,27.2414664210103,6.41858054152187,23.0161365287655,13.1940520074686,6.78176435913548,11.9342930149154,29.0209238628584,8.5107783703671,23.0444232128363,14.0699252543776,3.65038042894141,18.2438629552298,24.8213796079681,8.83866326370155,38.291948880347,0.211255286311942,0.637812899895131,0.209658645508376,0.673971786878971,2.4028302854641,1.76798145366788,0.285012743741249,1.59133341759272,0.182664153764634,0,1.63841583378639,0.889509253863555,1.28019066769952,0.400395987036012,0,1.32208974556972,0.954053754535364,1.1384259382189,1.76171156811282,2.6759125968766,1.32171328579026,6.72610275577843,0.263384084775077,4.32761494250433,5.10913991573914,6.7848494669838,3.00935691703221,3.58514493296949,7.101717086021,1.94826728407911,10.6954038609767,9.42738903919479,6.42448294292501,6.77009659412539,6.53265730600943,4.55207716459574,2.46656856905514,1.93445012450094,0.869409257205157,0.741432815810302,0.535081656179426,0,3.17266159553185,2.68254345521345,6.52892146416997,7.08455137654608,1.27426165729639,1.30216690771284,2.85135613334512,0.451725357233318,0.639933055772092,2.49861453104692,3.31488152861624,0.821127996921047,9.27391018833769,5.61624411145365,3.62061009706997,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0.79504962946682,0.860234595106124,0.347140501607594,0,0.419499436209906,1.37559020970034,0.208994966536811,0.516833518338658,1.42306505074684,0.66944122552934,0.402829317109147,0,0,0.367663080345869,0,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0.183201743930407,346.582497856846,550.647975090622,0,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,3.3204282985047,5.55582615091933,3.99533719692656,0,0,0,0,0,0,0,0,0,0,0,87.6940563454779,7.39606845711099,0.621984346622316,0.720599767084807,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,14.1862147345388,9.48761329381876,10.1390998661001,0,0,0,0,0,129.578215142863,98.7232815373282,377.118117226792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,9.49142483601914,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,1.29549549661284,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,36.5362278647162,32.1147626999798,41.5842446637139,24.7761046476101,39.0794159431885,49.9324449618392,44.2825778535254,39.6562588147135,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,1.4098700508785,0,1.02555725490326,0,0,0.284136146806413,0,0,0,0,0.703347082052564,0,0.16480387422676,0,0.398495976502139,0,0,0,0,0,0,0,0,0.690503839458535,21.5534783112246,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.494255755786011,0.626531697032732,0,0,0,0,0,0,0,1.20990716048664,0,0.758238955541855,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313808538937,0,0,0,0.273810757783986,0,0.429765441419957,3.94331031418972,0,0.229160424011684,0,0.199679000498991,0.429226048136571,1.33902874465124,0.403100834920358,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.449947783103001,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0,0.896436696664224,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0.113312091520126,0.732761168390412,1.32506888912221,0.129282956361551,0.79339561045614,0,0,3.73755943986931,2.51526888159466,0.414239055347196,2.48083010905975,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0.488105059607853,0.751145584238999,0.573409195690071,0.443716206147409,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0.450772826991655,0.380805212168795,0,0,0.751873899297419,0,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0.260994291965212,0.22670592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| ||
|short_description=p3@LMNB1 | |||
}} | }} |
Latest revision as of 01:50, 20 September 2015
Short description: | p3@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LMNB1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 4bp_to_ENST00000494185_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.82e-42 | 108 |
hematopoietic system | 4.49e-39 | 98 |
blood island | 4.49e-39 | 98 |
immune system | 3.08e-28 | 93 |
bone marrow | 2.23e-24 | 76 |
bone element | 9.20e-22 | 82 |
skeletal element | 7.83e-19 | 90 |
blood | 6.50e-17 | 15 |
haemolymphatic fluid | 6.50e-17 | 15 |
organism substance | 6.50e-17 | 15 |
skeletal system | 7.47e-16 | 100 |
lateral plate mesoderm | 2.96e-12 | 203 |
connective tissue | 1.02e-07 | 371 |