FFCP PHASE1:Hg19::chr6:117746827..117746839,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:117746827..117746839,-
|short_description=p3@ROS1
|description=CAGE_peak_3_at_ROS1_5end
|association_with_transcript=178bp_to_ENST00000368507,ENST000003685...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6098 | |EntrezGene=6098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10261 | |HGNC=10261 | ||
|TSSclassifier=strong | |||
|UniProt=Q5H8Y1,P08922 | |UniProt=Q5H8Y1,P08922 | ||
|association_with_transcript=178bp_to_ENST00000368507,ENST00000368508,NM_002944,uc003pxp.1,uc011ebi.1_5end | |||
|cluster_id=chr6:117746827..117746839,- | |||
|coexpression_cluster_id=C131 | |||
|description=CAGE_peak_3_at_ROS1_5end | |||
|id=chr6:117746827..117746839,- | |||
|ontology_enrichment_celltype=CL:0000515!5.05e-13!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.15e-15;30!UBERON:0007297;2.21e-15;2!UBERON:0008947;1.39e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.97e-28!20;UBERON:0002619!8.83e-26!22;UBERON:0001869!2.26e-24!32;UBERON:0001893!7.87e-23!34;UBERON:0000956!1.44e-22!25;UBERON:0000203!1.44e-22!25;UBERON:0000200!5.79e-22!6;UBERON:0002791!5.13e-20!33;UBERON:0002020!2.24e-19!34;UBERON:0003528!2.24e-19!34;UBERON:0002780!1.37e-18!41;UBERON:0001890!1.37e-18!41;UBERON:0006240!1.37e-18!41;UBERON:0003080!4.27e-18!42;UBERON:0002771!1.44e-16!3;UBERON:0000955!1.37e-15!69;UBERON:0006238!1.37e-15!69;UBERON:0001049!7.23e-15!57;UBERON:0005068!7.23e-15!57;UBERON:0006241!7.23e-15!57;UBERON:0007135!7.23e-15!57;UBERON:0001017!1.66e-14!82;UBERON:0007023!2.62e-14!115;UBERON:0002616!2.81e-14!59;UBERON:0005743!1.10e-13!86;UBERON:0000073!4.39e-12!94;UBERON:0001016!4.39e-12!94;UBERON:0003056!9.32e-12!61;UBERON:0001871!8.32e-11!7;UBERON:0003075!1.75e-10!86;UBERON:0007284!1.75e-10!86;UBERON:0001872!2.10e-10!5;UBERON:0002346!6.85e-10!90;UBERON:0000025!1.14e-08!194;UBERON:0000033!1.36e-08!123;UBERON:0000153!4.84e-08!129;UBERON:0007811!4.84e-08!129;UBERON:0002171!3.13e-07!1;UBERON:0006518!3.13e-07!1;UBERON:0008949!3.13e-07!1;UBERON:0000101!3.13e-07!1;UBERON:0002167!3.13e-07!1;UBERON:0001301!3.52e-07!1;UBERON:0001282!4.18e-07!1;UBERON:0009842!4.18e-07!1;UBERON:0003704!4.18e-07!1;UBERON:0001171!4.18e-07!1;UBERON:0001172!4.18e-07!1;UBERON:0004111!6.69e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.15e-29;1!UBERON:0006518;1.15e-29;1!UBERON:0008949;1.15e-29;1!UBERON:0000101;1.15e-29;1!UBERON:0002167;1.15e-29;1!UBERON:0001301;2.73e-29;1!UBERON:0001282;2.73e-29;1!UBERON:0009842;2.73e-29;1!UBERON:0003704;2.73e-29;1!UBERON:0001171;2.73e-29;1!UBERON:0001172;2.73e-29;1!UBERON:0002048;2.09e-12;22!UBERON:0000117;2.09e-12;22!UBERON:0000171;2.09e-12;22!UBERON:0000170;2.09e-12;22!UBERON:0000058;2.98e-12;10!UBERON:0006947;1.04e-10;3!UBERON:0001280;1.04e-10;3!UBERON:0004647;1.04e-10;3!UBERON:0004054;1.04e-10;3!UBERON:0002394;2.35e-08;4!UBERON:0005904;2.35e-08;4!UBERON:0003928;2.35e-08;4!UBERON:0005178;1.84e-07;34!UBERON:0002224;1.84e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.99e-30,1;UBERON:0006518,9.99e-30,1;UBERON:0008949,9.99e-30,1;UBERON:0000101,9.99e-30,1;UBERON:0002167,9.99e-30,1;UBERON:0001301,1.78e-29,1;UBERON:0001282,4.20e-29,1;UBERON:0009842,4.20e-29,1;UBERON:0003704,4.20e-29,1;UBERON:0001171,4.20e-29,1;UBERON:0001172,4.20e-29,1;UBERON:0002048,2.09e-12,22;UBERON:0000117,2.09e-12,22;UBERON:0000171,2.09e-12,22;UBERON:0000170,2.09e-12,22;UBERON:0005597,2.09e-12,22;UBERON:0000118,2.09e-12,22;UBERON:0006947,8.99e-11,3;UBERON:0004054,8.99e-11,3;UBERON:0001280,1.20e-10,3;UBERON:0004647,1.20e-10,3;UBERON:0005171,1.20e-10,3;UBERON:0005904,2.11e-08,4;UBERON:0005178,2.86e-08,34;UBERON:0002224,2.86e-08,34;UBERON:0005181,4.72e-08,35;UBERON:0005153,1.19e-07,37;UBERON:0008947,1.82e-07,38;UBERON:0003258,1.82e-07,38;UBERON:0005177,2.43e-07,101;UBERON:0000058,6.77e-07,19 | |||
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|short_description=p3@ROS1 | |||
}} | }} |
Latest revision as of 01:53, 20 September 2015
Short description: | p3@ROS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ROS1_5end |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | 178bp_to_ENST00000368507, ENST00000368508, NM_002944, uc003pxp.1, uc011ebi.1_5end |
EntrezGene: | ROS1 |
HGNC: | 10261 |
UniProt: | Q5H8Y1P08922 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.99e-30 | 1 |
right lung lobe | 9.99e-30 | 1 |
lower lobe of lung | 9.99e-30 | 1 |
lobe of lung | 9.99e-30 | 1 |
right lung | 9.99e-30 | 1 |
epididymis | 1.78e-29 | 1 |
intralobular bile duct | 4.20e-29 | 1 |
acinus | 4.20e-29 | 1 |
intrahepatic bile duct | 4.20e-29 | 1 |
portal lobule | 4.20e-29 | 1 |
hepatic acinus | 4.20e-29 | 1 |
lung | 2.09e-12 | 22 |
respiratory tube | 2.09e-12 | 22 |
respiration organ | 2.09e-12 | 22 |
pair of lungs | 2.09e-12 | 22 |
lung primordium | 2.09e-12 | 22 |
lung bud | 2.09e-12 | 22 |
male genital duct | 8.99e-11 | 3 |
internal male genitalia | 8.99e-11 | 3 |
liver parenchyma | 1.20e-10 | 3 |
liver lobule | 1.20e-10 | 3 |
hepatic duct | 1.20e-10 | 3 |
duct of male reproductive system | 2.11e-08 | 4 |
thoracic cavity element | 2.86e-08 | 34 |
thoracic cavity | 2.86e-08 | 34 |
thoracic segment organ | 4.72e-08 | 35 |
epithelial bud | 1.19e-07 | 37 |
respiratory primordium | 1.82e-07 | 38 |
endoderm of foregut | 1.82e-07 | 38 |
trunk region element | 2.43e-07 | 101 |
duct | 6.77e-07 | 19 |