FFCP PHASE1:Hg19::chr2:216237000..216237103,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:216237000..216237103,-
|short_description=p28@FN1
|description=CAGE_peak_28_at_FN1_5end
|association_with_transcript=58bp_to_ENST00000485567_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000485567_5end | |||
|cluster_id=chr2:216237000..216237103,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_28_at_FN1_5end | |||
|id=chr2:216237000..216237103,- | |||
|ontology_enrichment_celltype=CL:0000055!9.02e-39!180;CL:0000057!6.94e-23!75;CL:0000680!4.82e-19!57;CL:0000056!4.82e-19!57;CL:0000355!4.82e-19!57;CL:0000183!3.78e-18!59;CL:0000187!1.39e-17!54;CL:0002371!7.52e-17!591;CL:0000144!9.69e-15!625;CL:0000222!3.31e-14!119;CL:0000393!8.96e-14!60;CL:0000211!8.96e-14!60;CL:0000220!9.75e-14!246;CL:0002321!3.39e-13!248;CL:0000192!1.19e-12!42;CL:0000514!1.19e-12!42;CL:0000359!3.71e-11!32;CL:0002620!8.82e-10!23;CL:0000548!4.60e-09!679;CL:0000004!4.60e-09!679;CL:0000255!4.60e-09!679;CL:0000048!1.41e-08!430;CL:0002494!1.42e-08!16;CL:0000012!1.57e-08!682;CL:0000723!2.82e-08!436;CL:0000034!1.58e-07!444;CL:0002334!2.14e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.37e-12;55!CL:0000359;6.03e-12;32!CL:0000723;1.16e-11;61!CL:0000187;3.90e-11;55!CL:0000057;7.82e-11;73!CL:0002620;1.48e-10;23!CL:0000048;1.92e-10;58!CL:0000192;2.71e-10;43!CL:0002494;1.51e-09;16!CL:0000349;2.07e-09;19!CL:0000393;8.02e-09;61!CL:0000211;8.02e-09;61!CL:0002320;8.98e-09;188!CL:0002334;2.53e-08;12!CL:0000034;3.50e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.30e-25,76;CL:0000680,2.12e-21,58;CL:0000056,2.12e-21,58;CL:0000355,2.12e-21,58;CL:0000187,9.89e-20,55;CL:0000048,1.35e-18,427;CL:0000723,4.40e-18,433;CL:0000034,1.67e-16,441;CL:0000393,8.69e-16,61;CL:0000211,8.69e-16,61;CL:0000192,4.28e-14,43;CL:0000514,4.28e-14,43;CL:0000359,1.42e-12,32;CL:0000222,1.56e-12,121;CL:0002620,1.91e-10,23;CL:0002321,9.94e-10,250;CL:0002494,1.30e-09,16;CL:0000349,2.97e-09,19;CL:0002334,2.92e-08,12;CL:0002320,4.23e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000355;3.19e-11;58!CL:0000514;2.71e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.78e-21!83;UBERON:0002329!1.78e-21!83;UBERON:0003077!1.78e-21!83;UBERON:0003059!1.78e-21!83;UBERON:0007282!1.78e-21!83;UBERON:0009618!1.78e-21!83;UBERON:0007285!1.78e-21!83;UBERON:0005256!2.29e-21!143;UBERON:0004290!2.59e-20!70;UBERON:0000486!9.58e-19!82;UBERON:0001134!1.81e-17!61;UBERON:0002036!1.81e-17!61;UBERON:0003082!1.81e-17!61;UBERON:0002385!1.11e-16!63;UBERON:0001015!1.11e-16!63;UBERON:0000383!1.11e-16!63;UBERON:0003914!3.99e-16!118;UBERON:0004872!9.70e-16!84;UBERON:0000490!1.87e-14!138;UBERON:0002100!4.69e-14!216;UBERON:0002049!6.27e-14!79;UBERON:0007798!6.27e-14!79;UBERON:0001637!1.80e-12!42;UBERON:0003509!1.80e-12!42;UBERON:0004572!1.80e-12!42;UBERON:0004535!4.08e-12!110;UBERON:0001009!5.41e-12!113;UBERON:0000055!9.64e-11!69;UBERON:0001981!1.21e-10!60;UBERON:0007500!1.21e-10!60;UBERON:0004537!1.21e-10!60;UBERON:0006965!1.21e-10!60;UBERON:0002199!3.37e-10!45;UBERON:0002416!3.37e-10!45;UBERON:0000468!1.22e-09!659;UBERON:0004573!1.49e-09!33;UBERON:0004571!1.49e-09!33;UBERON:0000475!1.65e-09!365;UBERON:0002097!6.80e-09!40;UBERON:0003102!8.37e-09!95;UBERON:0000119!8.73e-09!312;UBERON:0000483!1.80e-08!309;UBERON:0003104!2.78e-08!238;UBERON:0009142!2.78e-08!238;UBERON:0000948!3.45e-08!24;UBERON:0005498!3.45e-08!24;UBERON:0004140!3.45e-08!24;UBERON:0009881!3.45e-08!24;UBERON:0004141!3.45e-08!24;UBERON:0003084!3.45e-08!24;UBERON:0007005!3.45e-08!24;UBERON:0004139!3.45e-08!24;UBERON:0004291!3.45e-08!24;UBERON:0004923!7.88e-08!57;UBERON:0007100!1.19e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.52e-09;42!UBERON:0003509;2.52e-09;42!UBERON:0004572;2.52e-09;42!UBERON:0004573;5.25e-09;33!UBERON:0004571;5.25e-09;33!UBERON:0002384;1.33e-08;198!UBERON:0002097;8.53e-08;41!UBERON:0002199;8.75e-08;46!UBERON:0002416;8.75e-08;46!UBERON:0000478;1.43e-07;24!UBERON:0002385;1.69e-07;31!UBERON:0001015;1.69e-07;31!UBERON:0000383;1.69e-07;31!UBERON:0000948;8.50e-07;22!UBERON:0001013;9.91e-07;14 | |||
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| ||
|short_description=p28@FN1 | |||
}} | }} |
Latest revision as of 02:01, 20 September 2015
Short description: | p28@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 58bp_to_ENST00000485567_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.30e-25 | 76 |
muscle precursor cell | 2.12e-21 | 58 |
myoblast | 2.12e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.12e-21 | 58 |
muscle cell | 9.89e-20 | 55 |
multi fate stem cell | 1.35e-18 | 427 |
somatic stem cell | 4.40e-18 | 433 |
stem cell | 1.67e-16 | 441 |
electrically responsive cell | 8.69e-16 | 61 |
electrically active cell | 8.69e-16 | 61 |
smooth muscle cell | 4.28e-14 | 43 |
smooth muscle myoblast | 4.28e-14 | 43 |
vascular associated smooth muscle cell | 1.42e-12 | 32 |
mesodermal cell | 1.56e-12 | 121 |
skin fibroblast | 1.91e-10 | 23 |
embryonic cell | 9.94e-10 | 250 |
cardiocyte | 1.30e-09 | 16 |
extraembryonic cell | 2.97e-09 | 19 |
preadipocyte | 2.92e-08 | 12 |
connective tissue cell | 4.23e-07 | 361 |